Corynebacterium confusum: CCONF_01055
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Entry
CCONF_01055 CDS
T09352
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ccou
Corynebacterium confusum
Pathway
ccou03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CCONF_01055 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccou03400
]
CCONF_01055 (pdg)
Enzymes [BR:
ccou01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CCONF_01055 (pdg)
DNA repair and recombination proteins [BR:
ccou03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CCONF_01055 (pdg)
Prokaryotic type
CCONF_01055 (pdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
WJY88775
LinkDB
All DBs
Position
214571..215266
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AA seq
231 aa
AA seq
DB search
MRDHKPSNSAKNLRKSDPRRAETINKILSEEYPGARCELDFRNPLELLVATVLSAQCTDA
RVNQVTPALFAKYPNAAAYAQADPAQLEEILRPLGFQRAKTKHLLGIGEGLVAHFGGDVP
RGIKELTSLPGVGRKTALVVRGNAFGLPGLTVDTHFQRLVTRLGLTEKTTPVAIEKDIAG
QLPEQEWTMFSHRLIFHGRAVCRARSPRCSDCVLAHLCPAAAEYGKSAPAQ
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaccataaaccctcgaattctgcgaaaaatcttcgcaaatccgacccgcggcgg
gccgagacgatcaacaaaattctcagcgaggaatacccgggcgctcgctgtgaactggac
tttcgcaacccgctggagctcctggtggccacggtgctctccgcgcagtgcaccgacgcg
cgggtcaaccaggtaacccctgcactcttcgcaaaatacccaaacgccgccgcctacgcc
caggccgatccggcgcagctcgaagaaattctgcgcccgctcggcttccagcgggccaag
accaagcacctgctggggataggcgaggggcttgtggcgcacttcggcggcgacgtcccc
cgcgggataaaggagctgaccagcctgcccggggtgggccgcaagaccgccctggtggtg
cgcggcaacgccttcggcctaccggggctgaccgtggacacgcacttccagcgcctagtc
acccggctcggcctgacggagaaaacgaccccggtggctattgaaaaggacatcgccggc
cagctgccggagcaagagtggaccatgttctcccaccgcctcatcttccatgggcgggcg
gtctgccgggcccgcagcccgcgctgcagcgactgcgtgctggcccacctgtgcccggcg
gctgcggaatacgggaaaagtgcgccggcccagtag
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