Corynebacterium coyleae: CCOY_00860
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Entry
CCOY_00860 CDS
T09177
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ccoy
Corynebacterium coyleae
Pathway
ccoy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccoy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CCOY_00860 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccoy03400
]
CCOY_00860 (pdg)
Enzymes [BR:
ccoy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CCOY_00860 (pdg)
DNA repair and recombination proteins [BR:
ccoy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CCOY_00860 (pdg)
Prokaryotic type
CCOY_00860 (pdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
WJY78803
LinkDB
All DBs
Position
200467..201258
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AA seq
263 aa
AA seq
DB search
MLGMAASTSPLKHRRPGAHPAAKGKETPIGRKRRARRINRTLAAAYPDAHAELDFTNPLE
LLVATALSAQTTDVRVNMVTPALFAKYPTAADYAEANQAEVEEIIRSTGFYRSKAANLIA
MGQKLVTDFGGEVPEKLEDLITLPGVGRKTAHVVRGNAFGYPGLTVDTHFQRLVKRMMLT
EETDPVKIEHAIAELIERREWTMFSHRIIFHGRRVCNARKPACGACPIAFDCPSFGVGPT
DPEEAAELVSGPERDHILRMVGL
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgttgggcatggccgcttcgacctctccattgaaacatcgccgcccaggcgcccatccc
gccgcgaaggggaaagagactccgatcgggcgtaagcgcagggcacgccgtattaaccgc
acgttggcggcagcgtatccggacgcacacgcggagttggactttactaacccgctggag
ttgctcgttgctacggcgctgtccgcgcagaccacggacgtacgggtgaacatggtcacc
ccggcgctgtttgccaagtaccccacggccgccgactacgcggaggccaaccaggcagag
gtggaggagatcatccgctcgaccgggttttaccgctccaaggcggcgaacctgatcgcg
atgggccagaagctggtcaccgattttggtggcgaggtgccagagaagctcgaggacctg
atcaccctgcccggggtgggccgcaagacggcgcatgtggtgcgcggcaacgcgttcggc
tacccggggctgacagtggacacgcacttccaacgcctggtcaagcgcatgatgctcaca
gaagagacggatccggtgaagatcgaacacgcgatcgcggaactgatcgagcgccgcgag
tggaccatgttctcccaccgcatcatcttccacggccgccgcgtctgcaacgcccgcaaa
ccggcctgcggcgcttgcccgatcgcgttcgactgtccctccttcggcgtaggtcccacc
gacccggaggaagccgccgaactggtctccggccctgagcgcgaccacattttgaggatg
gtgggcctgtga
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