Colias croceus (clouded yellow): 123692171
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Entry
123692171 CDS
T08651
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc04013
MAPK signaling pathway - fly
ccrc04120
Ubiquitin mediated proteolysis
ccrc04140
Autophagy - animal
ccrc04144
Endocytosis
ccrc04214
Apoptosis - fly
ccrc04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123692171
09130 Environmental Information Processing
09132 Signal transduction
04013 MAPK signaling pathway - fly
123692171
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123692171
04140 Autophagy - animal
123692171
09143 Cell growth and death
04214 Apoptosis - fly
123692171
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
123692171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccrc04131
]
123692171
04121 Ubiquitin system [BR:
ccrc04121
]
123692171
Enzymes [BR:
ccrc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123692171
Membrane trafficking [BR:
ccrc04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
123692171
Ubiquitin system [BR:
ccrc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
123692171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-rbx1
Sina_ZnF
zf-RING_5
zf-TRAF
RING_XB3-XBAT31
zf-Nse
U-box
zf-RING_10
TRAF3_RING
zf-ANAPC11
Prok-RING_4
zf-RING_6
Sina_RING
zf-P11
Motif
Other DBs
NCBI-GeneID:
123692171
NCBI-ProteinID:
XP_045492825
LinkDB
All DBs
Position
5:10129812..10134357
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AA seq
416 aa
AA seq
DB search
MDHNKTKNASEGIAPMGITALNETVLSDQPESRYECPVCLNWLRDPVITTCGHKFCKGCI
TSWLQNSGHCPIDNINLSMKVDIFPDNYTKREILEQRMSCPFASKGCTVKVTPLDLDAHI
STCEFNQPEASTQHNVKIPCSFKAVGCSEMFDSQEDANTHMHNDVLSHMSLLMNAYSKIK
IDNDMSNASMDGKAQEALLWDPPEKGSEGTPSTPINDTSALIRALYERVVVLEQRNREQD
IVIANISKQLSAFAVAKMKQNNDMLLRYCMGHYIWKVDNFKARLDAMLKDHNKMLYSPGF
YTSPNGYRFCVRLNISPLNPLCFALHVHLMKTENDDYLDWPFNGRISFAMINQYDHEYTQ
RDTMMSNSSLVAFRKPNTEICVRGFGYTEYAVVSDVVRNGFVKDDVLIIKVHIKCV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggaccataataaaacaaagaatgcatcagaaggcatagcgcctatgggtataacagcc
ttaaatgaaacagtgctgagtgatcagccagagtcaagatatgaatgcccagtatgtctc
aactggctgcgagaccctgttatcacaacatgtggccataagttttgtaagggctgcatt
acttcatggttacaaaatagtggtcattgccccattgataatataaaccttagtatgaag
gttgatatatttcctgacaattatacaaagagggagattctagaacaaaggatgtcttgt
ccgtttgcttcaaaaggatgtacagtaaaagtgacacccttagacctagacgcacacata
tccacatgcgaattcaaccagcctgaggcatcaacgcaacacaatgttaaaataccctgt
tcattcaaagctgttggttgcagtgaaatgtttgatagccaggaagatgccaacacacac
atgcataatgatgtattgagccatatgagtttactaatgaatgcttattcgaaaatcaaa
atcgacaacgacatgtcaaacgcaagcatggatggaaaagcgcaagaggctctcttgtgg
gacccgccggaaaagggaagcgaggggacaccttccacacctattaatgatacgagtgcg
cttataagagccctctacgaaagagtagttgttttggaacaaaggaaccgtgaacaagat
atagtaattgctaatatttccaagcaattatcagcatttgctgtagctaagatgaaacag
aacaatgacatgctcctgcgctactgtatggggcattatatatggaaggttgataacttt
aaagcaagattggatgctatgctcaaggatcataacaaaatgttgtatagccctgggttt
tatacttcaccaaatggatatagattctgcgtccgtctcaacatatcccccctcaacccg
ctgtgcttcgccctccacgtgcacctcatgaagacagaaaacgacgactatctagactgg
cctttcaacggtcggatttcattcgcaatgatcaaccaatatgaccatgaatacactcaa
cgagacacgatgatgtctaattcatcattagtggccttcagaaaaccaaatacggagata
tgtgttcgaggctttggatacacggaatatgctgtggtcagtgatgtagtgagaaacggc
tttgtgaaggacgatgtgctgattataaaagtgcatatcaagtgtgtatga
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