Cariama cristata (Red-legged seriema): 104154446 Help Entry 104154446         CDS       T08341                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism ccri  Cariama cristata (Red-legged seriema) Pathway ccri04010   MAPK signaling pathway ccri04120   Ubiquitin mediated proteolysis ccri04140   Autophagy - animal ccri04144   Endocytosis ccri04620   Toll-like receptor signaling pathway ccri04621   NOD-like receptor signaling pathway ccri04622   RIG-I-like receptor signaling pathway ccri05132   Salmonella infection ccri05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:ccri00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     104154446 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     104154446 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     104154446 (TRAF6)    04140 Autophagy - animal     104154446 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     104154446 (TRAF6)    04621 NOD-like receptor signaling pathway     104154446 (TRAF6)    04622 RIG-I-like receptor signaling pathway     104154446 (TRAF6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     104154446 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     104154446 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ccri04131]     104154446 (TRAF6)    04121 Ubiquitin system [BR:ccri04121]     104154446 (TRAF6) Enzymes [BR:ccri01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      104154446 (TRAF6) Membrane trafficking [BR:ccri04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     104154446 (TRAF6) Ubiquitin system [BR:ccri04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     104154446 (TRAF6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 Sina_ZnF SlyX Med21 PspA_IM30 RING_XB3-XBAT31 TRAF3_RING zf-RING_11 DUF4455 HAP1_N Spc29 CENP-F_leu_zip U-box ATG16 UPF0242 CEP104_ZnF DUF1664 DUF16 PUMA_CC HMMR_N ADIP Motif Other DBs NCBI-GeneID:  104154446 NCBI-ProteinID:  XP_009699165 LinkDB All DBs Position Unknown AA seq 545 aa AA seqDB search MSLLYSNNSCGARDVESGCCAAMASACSVGAKEDSVSVSSGTGNPPSSFTEETQGYDVEF DPPLESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPD NFAKREILSLTVKCPNKGCTMKMELRHLEDHQLQCDFSTVECPQCQGAFQKNHLKEHMTQ ECPRRQVCCPNCATSMAYEDKELHDQTCPLANVFCEYCNTVLIREQMPNHYDNDCPTAPV PCFYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQSFQNISVTAANPVPFINGLPFEPAL FSHVSPAAYDCNPEVENFKETIQQLEGRLVRQDHQIRELIAKMETQNTHMAELKRTIRNL EGKITEMEAQQCNGIYIWKIENFSGLQKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQL PNAQRCANFISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSEGPERQNHEEVMEAKPELL AFQRPTIHRNPKGFGYVTFMHLQTLKQRTFVKDDTLLVRCEVLTRLDLNSLRREGFQARS TDGTV NT seq 1638 nt NT seq  +upstreamnt  +downstreamnt atgagcttgctatacagcaataacagttgtggagcccgagacgtggaaagcggctgctgt gcagccatggccagtgcctgcagcgttggagcgaaagaagacagcgtaagcgtcagcagt gggactggaaaccctccaagttctttcacagaggaaacacaagggtatgatgtggagttt gatccacccttggaaagtaaatacgaatgtccaatctgtttgatggctcttcgggaggca gtgcagacaccatgtggacaccgtttctgcaaaggctgcattgtcaaatcaataagagat gcaggtcacaaatgtccggtagacaacgaaattctgcttgaaaatcaactttttcctgac aactttgctaaacgggaaatactgtcattaacggttaagtgtcccaacaagggctgcaca atgaagatggagctgaggcatttagaggaccaccagttgcagtgtgatttttccactgtg gaatgcccacagtgccaaggagccttccagaagaaccatctgaaagagcacatgacacag gagtgtccgagacgtcaagtctgttgtccaaactgtgccacatctatggcctatgaagat aaagagcttcatgaccaaacctgcccacttgcgaatgtattttgtgaatattgcaacaca gtgctcatcagagagcagatgcctaaccattatgacaatgactgtcctactgccccagtg ccatgtttttacagtgcctttggctgtcctgaaaagatgcaaaggaatgaactggcacga catatgcaggagttcactcaggttcacatgagaatgatggctcagagttttcaaaatatc agtgttactgctgcaaatcctgtacccttcatcaacggccttccctttgagcctgccctt ttctcacacgtgtcgcctgctgcgtatgattgtaatccagaagttgaaaacttcaaagaa actattcagcagttggaaggtcgtctggtaagacaagatcaccaaattagagaactcatt gctaaaatggagactcagaacactcacatggcagaactcaaacgtactatccgaaatttg gagggaaagattactgaaatggaggcacagcaatgtaacggtatttatatctggaagatt gagaacttcagtggacttcagaaggcccaggaagaagagagacctgttgtgatgcacagt cctggcttctatactggaaagcctggctacaagctgtgtttgcgcctgcatatccaatta ccaaatgctcagcgttgtgctaattttatatctctgtttgtccacactatgcagggagaa tatgacagccatctgccttggcctttccaaggcactatacgactttctattttggatcaa tcagaaggccctgaaaggcaaaatcatgaagaagtaatggaagccaagccagagttacta gccttccagagaccaacaattcaccgcaatccaaaaggttttggttatgtgactttcatg cacctgcaaaccttgaaacaaagaaccttcgtaaaggatgacacccttctggtgcgctgc gaagttctaacgcgtctagatttaaacagtctccgcagagaaggatttcaggctcgcagt actgatggaactgtgtag

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