Cariama cristata (Red-legged seriema): 104163242
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Entry
104163242 CDS
T08341
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin gamma-C3-like
KO
K16497
protocadherin gamma subfamily C
Organism
ccri
Cariama cristata (Red-legged seriema)
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccri04515
]
104163242
Cell adhesion molecules [BR:
ccri04515
]
Cadherins
Protocadherins
104163242
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_C_2
Cadherin_2
Cadherin_CELSR2_9th
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
104163242
NCBI-ProteinID:
XP_009700473
LinkDB
All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
GGNKKYFGVDLTSGALLVSERIDREELCGALSPCTLSFEIVVENPLELYSGAVEIQDIND
NDPVFPSSQARLEISESVGGGGRFPLXRDPDVGINSLQTYQLSANPHFVLDVQTRVDGSK
YAELVLEKELDREEQRELHLVLTALDGGSPPRSAHVQIHIDVVDANDNAPVFNQSTYKAS
VRENTPSGALVTRISAYDLDDGPNGDIVYSFSSHTPAKVRELFALDSATGELRVKGQLDY
EETKLYEIYLQAKDKGVAPGVAHCKVLVEVVDVNDNIPEVTVTSVYSPVPEDATPGTVVA
LLSVTDLDSHDNGLVNCFISPGIPFMLSSSLKNYYTLKTKAALDREKASEYNITITARDS
GSPPLSAVKQILVQVSDVNDNAPKSSQDSYDVYVLENNMPGIPILNVSATDPDLGRNAHL
SYTLLQGDPTVGHLFSINRENGTLYLLTSLDHEDQVEFSMVVQVQDGGSPPLATNVSVSV
FVTDLNDNAPTVLYPYPNTTATYTDVVAPGTPAGHIVTKVVAVDADAGYNAWISYTLLQA
TDSSLFSVGLHSGEIFTARQLREDDAPQHTLVILLKDHGEPVLSTSATVSISVAEMVKEV
LTDLTDVAPTNDTRRHVTFYLILAVILVSAAFFITMLSVGIFKCYKWRQSKELFNSSRST
LYRTPGPFHHIDAVRGGFTPPNFYHQVYLTTDSRQSDLLCKKPFTSSPLGSRQSTIRNGE
PGLYHQIVGTASRLPTPAEVM
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
ggcggcaataagaagtacttcggggtggatctgacgagcggcgcgttgctggtgagtgag
cggatagaccgggaggagctctgcggtgcgctctctccctgcaccctcagctttgagatc
gtggtggaaaacccgctggagctgtacagcggcgctgtggagatccaggacatcaatgac
aacgacccggtttttcccagcagccaggcgaggctggaaatcagcgagtcggtggggggc
ggagggcgcttcccgctanngcgagaccccgatgtggggattaactctttgcaaacctac
cagctcagcgccaacccccactttgtgctcgacgtgcagacgagggtggatggcagcaag
tacgcggagctggtgctggagaaggagctggacagggaggagcaacgggagctgcacttg
gtcttgactgcgctggatggaggcagcccaccacggtcagcccacgtgcagatccacatt
gacgttgtggatgccaacgataacgccccggtcttcaaccagtccacctacaaggccagc
gtgagggagaacacgcccagtggtgccctggtcaccaggatcagtgcatacgatctggat
gatgggcctaatggagacatcgtctattccttcagcagccacacacctgccaaggtacga
gaactctttgctctggactcggccacaggcgagttgagggtcaagggacagctggactat
gaggaaacgaagctgtatgagatttacttacaggctaaagacaagggtgttgctcctggc
gtggctcattgcaaagtgctggtggaagtcgtggatgtgaatgacaacattccagaggtg
acggtgacttctgtgtacagccctgtgcctgaagatgcaaccccagggacggtcgtagct
ctgctgagtgtaacggacttggactcccatgacaatggtctggtgaactgcttcatttcc
cctgggatcccgttcatgctcagctcctccctcaaaaattactacacattgaaaacaaag
gcagctctggaccgggaaaaggcatcggagtataacatcactatcacagccagggactcg
ggctcgccacccttgtctgcggtaaaacagatcctggtgcaggtgtcagatgtcaatgac
aacgcgcccaagtcttcccaggactcctatgatgtgtatgtgctggagaacaacatgcct
ggcatccccatccttaatgtgagcgccacagacccggatcttgggcgcaacgcccatctc
tcctataccctcttgcaaggtgaccccactgtaggccacctcttctccatcaaccgggag
aatggcacactctacctgctcacctccctggaccacgaggaccaggtggagttcagcatg
gtggtgcaggtccaggacggtggctcaccgcctctggccactaatgtctcagtcagtgtg
tttgtcactgacctcaatgacaatgccccaaccgtgctgtacccttaccccaacaccact
gccacatataccgatgtggtggctccaggcactcctgctggccacatagtcactaaggtg
gtggcggtggatgcagatgcagggtacaatgcctggatttcctataccctgttgcaggcc
accgactccagcctcttctcagttgggctgcacagcggggagatcttcacggcccgtcag
ctccgggaggatgatgctccccagcacacactagtcattctgctgaaagaccatggggag
cctgtgctgtccaccagtgccactgtctccatctctgtggccgagatggtcaaggaggtg
ctcactgacctcactgatgtggcacccaccaatgataccaggaggcacgtgactttctat
ctcatcttggctgtgattttagtgtcagcagctttcttcatcaccatgttgtcagtggga
atcttcaagtgctacaagtggaggcagtcaaaggagctgttcaacagctccaggagcacc
ctgtacaggacaccagggcccttccaccatattgacgctgtgcggggtggcttcacgcca
cccaacttctaccatcaggtctatctcaccacggactctcgccagagtgatctcctgtgt
aaaaagcccttcacttccagccctctggggagccgccagagcaccataaggaatggtgag
ccagggctgtaccaccagatcgtgggcactgccagccggctccccacgcctgctgaggta
atgtag
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