Cariama cristata (Red-legged seriema): 104165244
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Entry
104165244 CDS
T08341
Symbol
DDX58
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX58
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri04622
RIG-I-like receptor signaling pathway
ccri04623
Cytosolic DNA-sensing pathway
ccri05164
Influenza A
ccri05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
104165244 (DDX58)
04623 Cytosolic DNA-sensing pathway
104165244 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104165244 (DDX58)
05168 Herpes simplex virus 1 infection
104165244 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ccri04054
]
104165244 (DDX58)
Enzymes [BR:
ccri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104165244 (DDX58)
Pattern recognition receptors [BR:
ccri04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
104165244 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C
Helicase_C
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
104165244
NCBI-ProteinID:
XP_009703122
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
NGKDVNSEMTDETEKSFETMMTFSEEGECDNNLSENICLASEGLYQSSSIYEPKKAWSYQ
TELPQPALNGKKTLIRVPTESGKTSVALLICEHHFQNVXSERKAKVVFLATKVPAYEQRK
XVFKQHFERSGYSVQGISGETVANVSVEKIIXDSDIIALTPQILVNSIEEGIISSLCIFT
LMRFDECHNTTGNHPYNVLXQKFNSSANRLPQIVGLTASVGVGNGKSIKETIEHICTRFY
LDIQTISTIRENKQRFRNKPETNVRWVKMRVLNHFADISGLMSETEALMKKIYSVDAVYQ
INKNDFGTQKYEHWIVATQKKLRLLQPADKEKESTICRALFICTEHLRKFNDAHIISEDA
CIEDALSYLTEFFTNVKNGLYTVREKQLTALFQEKEPELIALSKDESNENPKLEELACIL
DEAYHYNPQTRTLIFAKTRAXGAALKKWIEANPLLSYINAGVLMGHGRIEQRQFLGTVGM
TPPMQKDVLDAFKTSQDSRLLIATSVADKGIDISECNLVVLYEYFGNITKMIQVR
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
ataatggcaaagatgtcaatagtgaaatgacagatgagactgagaagagctttgaaacca
tgatgacattttctgaagaaggagaatgtgataataatctcagtgaaaatatctgtttag
cttcagaagggctctaccagtcttcatctatttatgaaccaaagaaggcttggagctacc
agactgaacttccacagcctgctctcaatgggaaaaagacattgatacgtgtgcccacag
aatctggaaaaacttctgtggcacttctgatttgtgaacaccattttcaaaacgtgnctt
cagaacgaaaagcaaaagttgtctttcttgcaaccaaagtgccagcgtacgaacaaagaa
aanctgtatttaagcagcattttgaaagaagtggatattctgttcaaggaattagtggtg
aaactgttgcaaatgtctctgtagaaaagattatataggacagtgacatcattgcactaa
caccccagattcttgtgaatagcatcgaggaagggatcattagctccctctgcatcttca
ctctgatgagatttgatgagtgccacaacactacaggcaaccatccttacaatgtgttat
gacaaaaatttaactcctctgcaaaccgcctgcctcagattgtaggtttaactgcttctg
ttggagttggtaatggcaagagcatcaaggaaacaatagagcacatctgtacccgcttct
atcttgacatacagaccatatccaccatcagagagaacaaacagaggttcagaaacaaac
cagaaacgaatgtcagatgggttaaaatgcgagttctgaatcactttgcagatatctcag
gtctgatgtctgagacagaggcattgatgaagaagatttactcagtggatgctgtctacc
aaatcaacaagaatgattttggaacacagaaatatgaacactggatagttgccactcaga
agaaattaagattgttgcaacctgcagacaaggagaaggagagcaccatttgtagagccc
ttttcatttgcactgaacacctgcggaaattcaatgatgctcacatcatcagtgaagatg
cctgcatcgaagatgctttatcctacttaactgaatttttcacaaatgtcaaaaatggtc
tgtatacagttagagagaagcaactgacagccctattccaagagaaagaaccagaactga
ttgccctttcaaaagatgaatcaaatgagaatcccaagctggaagagcttgcttgcatcc
tggatgaagcataccactataacccacagactcgcactcttatctttgccaagacaagag
cctaaggagctgctttgaagaagtggatagaagcaaaccctctacttagctacataaatg
caggtgtgttgatgggtcatggaagaatagaacaaagacagtttcttggtactgtaggta
tgacccccccaatgcagaaggatgtattggatgcattcaaaaccagccaagacagcagac
tgctaattgctacatctgttgctgacaaaggcattgatatttctgagtgcaaccttgttg
tgctctatgaatactttggtaatatcacgaaaatgatccaagtcagag
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