Cariama cristata (Red-legged seriema): 104167668
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Entry
104167668 CDS
T08341
Name
(RefSeq) LOW QUALITY PROTEIN: slit homolog 1 protein-like
KO
K06838
slit 1
Organism
ccri
Cariama cristata (Red-legged seriema)
Pathway
ccri04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ccri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104167668
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ccri00536
]
104167668
Glycosaminoglycan binding proteins [BR:
ccri00536
]
Heparan sulfate / Heparin
Axon guidance molecules
104167668
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRRCT
LRR_14
LRRNT
EGF
LRRCT_2
EGF_4
EGF_Teneurin
hEGF
EGF_2
EGF_TEN
FNIP
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
104167668
NCBI-ProteinID:
XP_009706292
LinkDB
All DBs
Position
Unknown
AA seq
787 aa
AA seq
DB search
DLSENFIQAIPRKAFRGATDLKNLQLDKNQISCIEDGAFRALRGLEVLDIPNVPSLPGPK
EGPSRGQTDPARAQLCSLSSCPCPAXNGIVDWRGKGLTAIPANLPETMTEIRLELNGIKS
IPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPKGVFAGLFAL
QLLLLNANKINCVRADAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLXVPPPALMX
XXXXKWLADFLRANPVETSGARCASPRRLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQL
NSECNSDVICPPKCRCESSVVECSNLKLTKIPERIPQSTAELRLNNNEISILEATGIFKK
LPHLKKINLSNNKVSEIEDGAFEGASSVSELHLTVNQLESVRSGMFRGLDGLRTLMLRNN
RISCVHNDSFTGLRNVRLLSLYDNQISTIAPGAFDTLQSLSTLNLLANPFNCNCQLAWLG
DWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCEEGQEETSCIPRPQCPQECTRLDT
VVRCSNKHLKALPKGIPKNVTELYLDGNQFTQVPGQLSTFKYLQLVDLSNNKISSLSNSS
FTNMSQLTTLILSYNSLQCIPPLAFEGLRSLRLLSLHGNDISSLPEGIFADVTSLSHLAI
GANPLYCSCNLRWLSSWVKTGYKEPGIARCAGPPDMEGKLLLTTPAKKFECQGPPALSVQ
AKCNPCLSSPCQNQGTCHNDPLGLYRCACPSGYKGRDCEVALSGCSSNPCANGGTCQPQE
GEGAGFR
NT seq
2365 nt
NT seq
+upstream
nt +downstream
nt
ggatctgagcgagaacttcatccaggccatccccaggaaagctttccgtggggccaccga
cctcaagaacctgcaactggacaagaaccagatcagctgcattgaggatggggctttccg
tgccctgcgggggctggaggtcctggacatccccaatgtgccgtctctccctggccccaa
ggaggggccgagcaggggacaaacggacccggcacgtgcccagctctgcagcttgtcctc
ttgcccctgccccgccnggaatggcatcgtggactggcggggcaaggggctgacggccat
ccctgccaacctgcctgagaccatgacagagatacgcctggagctcaacggtatcaagtc
catccccccaggtgccttctcgccctacaagaagctgcggaggatagacctgagcaacaa
ccagatctcagaaattgcccctgacgccttccagggactgcgctcactgaactccctggt
gctgtacggcaacaagatcacggacctccccaagggcgtcttcgcgggactttttgccct
gcagctgctgctcctcaatgccaacaagatcaactgtgtgcgggcagacgccttccagga
cctgcagaacctctcgctgctctcgctctatgataacaagatccaaagcctggccaaggg
caccttcacctccctgcgcgccatccagaccctgtgagtgcccccgccagctctgatgnn
nnnnnnnnnnnngaaatggctggcagacttcctccgcgccaaccccgtcgagaccagcgg
tgcccgctgtgctagcccccggcgcctggccaacaagcgcatcggccagatcaagagcaa
gaagtttcgctgctcggccaaagagcagtatttcatcccagggacggaggattaccagct
gaacagcgagtgcaacagcgatgtgatctgccccccgaagtgccgctgtgaatccagtgt
ggtcgagtgctccaacctgaagctcaccaagatcccagagcgcatcccacagtccacagc
tgagctgcgcctgaacaacaatgaaatctccatcctggaggccactggcatcttcaagaa
actcccgcatctgaagaaaatcaacctcagcaacaacaaggtgtcagagatcgaggatgg
ggcattcgagggggcatcctctgtcagcgagctgcacctcaccgtcaaccagctggagtc
tgtgcggagcggcatgttcaggggtctggatgggctgaggaccctgatgctgaggaacaa
ccgcatcagctgcgtccacaacgacagcttcacggggctgcgcaacgtccgcctgctctc
cctgtatgacaaccagatcagcaccattgcgccgggcgccttcgacacgctgcagtccct
ctccacgctgaacctgctcgccaaccccttcaactgcaactgccagctggcctggctggg
ggactggctgcgcaagaggaagatcgtgacagggaacccacggtgccaaaaccccgactt
cctccggcagatccctctccaggatgtggctttccccgacttcaggtgtgaggaaggtca
ggaggagaccagctgcatcccccggccccagtgcccgcaggagtgcacacgcctcgacac
cgtcgtccgctgcagcaacaagcacctcaaggccctgcccaaggggatccccaagaacgt
cacggagctctacctggatggaaaccagttcactcaggttccagggcagctctccacctt
caagtacctgcagcttgtcgatctgagcaacaacaagatcagctccctgagcaactcctc
cttcaccaacatgagccagctcaccaccctgatcctcagctacaactccctgcagtgcat
ccctccactggccttcgagggcctccgctccctccggctgctgtctctccacggcaatga
catctccagcctccctgaaggcatcttcgcagacgtcacctccttgtcccacctagccat
cggggccaaccccttgtactgcagttgtaacctgcgctggctctctagttgggtcaagac
agggtacaaggagccaggcatcgcccgctgtgctgggccccccgacatggaaggcaaact
gctgctcaccacccctgccaagaagtttgagtgccaaggcccgcctgccctgagtgtcca
ggccaagtgcaacccctgcctctccagcccctgccagaaccagggcacctgccacaacga
cccccttggcctctaccgctgtgcctgccccagcggctacaagggcagggactgcgaggt
ggcactcagtggctgctcctccaacccctgtgccaacggggggacctgccaacctcagga
aggggaaggagctgggttcaggtga
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