Chrysoperla carnea: 123291904
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Entry
123291904 CDS
T09255
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ccrn
Chrysoperla carnea
Pathway
ccrn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
123291904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccrn03400
]
123291904
Enzymes [BR:
ccrn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
123291904
DNA repair and recombination proteins [BR:
ccrn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
123291904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
mRNA_cap_enzyme
BRCT
BRCT_2
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
123291904
NCBI-ProteinID:
XP_044728298
LinkDB
All DBs
Position
1:87357840..87360115
Genome browser
AA seq
743 aa
AA seq
DB search
MECELSKITFYNLCNCLENIVQVDSKEQKCETLVNLFNNVFKTQDVNQIFNILRLILPEF
DKSRTTYGMKEAAIGKYVAHTFNIDKHSDDYKMLYINDYPEMKRSKDYALVVSKILYRYH
NTPPSELNIFKINEYLTNISKKSDFYKNLLNILSPVENKWIIRIILKNIRLGLTPESILT
LFHPRAVSLFEHNNDLYSIIKNCIQPERIIEGNGLDLFQFIRPMLSIKASKKLLSEIALI
NYFVEEKFDGERFQLHYDRNKKECKWFSRNGHVYPFEALTNEIPSILISTVENVILDGEM
VGFNLNTKKYGTKGFNYDIKKVKDTSSYQASFIIFDIIYLNHRNLSEAPLQERRKLLETN
LLKYENDFIKISIVNHLENYNDILKYLTKAISNDLEGIVIKDPTSFYLSNKRTSNWIKIK
PDYFEGLITDLDLLIIGGYYGDGRQSGQIATFLLAVFDETQNNYVSIGQSGLGLTKNDLI
KLQIKLGPHWQKVGKNDKMPKMVKWGKEKPHVWIEPKHSIILEIKASELHRSDNFITKYT
LRFPRIVRVRYDKPFDQCLKLSEYRELVSNKHDKPVVKLARLPTINDLLITSDNDTIQNI
KTEPIVPLNRILNDRKFSVLSGTENLTETDIKKLIIENGGIVINNYKNHEDCLLIGDKRN
FLIQTEINLNKRDIVKVSWLLKIIANQKYIDWNPEDALLVCTLERKKEFNLNFDSYCDHY
TRHADYNSLENCLNNMSNTMDIC
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggaatgtgaattgtctaagataacattttacaatctgtgtaattgtttagagaatatt
gtgcaagtagacagcaaagaacaaaaatgtgaaacccttgtaaacttgtttaataacgta
tttaagacacaagatgtaaatcaaatatttaacatattacgattaattttaccagaattt
gataaatcacgaactacatatggaatgaaagaggctgcaattggaaaatatgttgcacat
acatttaacattgataaacattcagatgattataaaatgttatacataaacgattatcca
gaaatgaaacgttccaaagactacgcgttagttgtatcaaaaatattatatcggtatcat
aatacaccaccaagtgaattaaatatttttaaaattaacgaatatttaacaaacatttca
aaaaaatcagacttttataaaaatttgttaaatatcttgtcacctgtcgaaaataaatgg
attattcgaatcattttaaaaaatatccgattaggtttaacacctgaaagtattttaaca
ttatttcatccaagagcagtaagtttattcgaacacaataacgatctatattcgattata
aaaaattgcatccaacccgaacgtattatcgaagggaatggattagatttgtttcaattc
atacgtccaatgctttctattaaagcgtcgaaaaaattattatccgaaatagctttaatt
aattatttcgttgaggaaaaattcgatggtgaacgatttcagttacattatgatcgtaat
aaaaaggaatgtaaatggttttcacgaaatggacatgtttacccatttgaagcgttaact
aatgaaattccttcaattttaatatcaactgttgaaaatgttattctggatggggaaatg
gtggggtttaatttgaatacgaagaaatacggaaccaaaggttttaattatgatattaaa
aaagtcaaggataccagtagctaccaagcatcgtttattattttcgatattatttattta
aatcatcggaatttatctgaagctccgttgcaagaacgaaggaaattattggaaactaat
ttattaaaatatgagaacgattttattaaaattagcatcgtaaaccatttagaaaactac
aacgatattcttaaatatttaaccaaagcgataagtaatgatttagaggggatcgttatt
aaagatcctacttcattctacttatcgaataaacgtacatcaaattggattaaaatcaaa
ccagattactttgaaggattaataacagatttagatttattaattattggaggatactac
ggggacggccgtcaaagtgggcaaattgcaacatttttactagccgttttcgatgaaaca
caaaataattacgtatcgatcggacaatctggtttaggtttaacaaaaaatgacctaata
aagttacagataaaattgggaccacattggcaaaaagtaggaaaaaatgataaaatgcca
aaaatggtgaaatggggtaaagagaaaccacatgtttggattgaacccaaacattcgatt
atattagaaataaaagcctcagaattacatcgttctgataatttcataacaaagtataca
ttacgatttccgcggattgttcgtgttcgatatgacaaacccttcgatcaatgtttaaaa
ttaagtgaatatcgtgagcttgtttcaaataaacatgataagcctgttgttaaattagca
cgattaccaacgattaatgatttacttattaccagtgataatgatacaattcaaaatatt
aaaactgagccaatagtaccattaaatcgtatattgaatgatcgaaaattctctgtatta
tctggtaccgaaaatctaacagaaactgatataaaaaagttaataatcgaaaatggtggt
attgtaataaataattataagaatcatgaagattgtttattaattggtgataagagaaat
tttctaatacaaactgaaataaatttaaataagcgagatatcgtaaaagtaagttggtta
ttaaaaattattgcaaatcaaaaatatattgattggaatcctgaagatgcgcttttagta
tgtacattggaacgaaaaaaagaatttaatttaaattttgattcgtattgtgatcattat
acgagacatgccgattataactcattagaaaactgtttaaataatatgtcaaatacaatg
gacatttgttga
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