Caulobacter vibrioides NA1000: CCNA_02642
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Entry
CCNA_02642 CDS
T00841
Name
(RefSeq) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ccs
Caulobacter vibrioides NA1000
Pathway
ccs00300
Lysine biosynthesis
ccs00550
Peptidoglycan biosynthesis
ccs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CCNA_02642
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CCNA_02642
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ccs01011
]
CCNA_02642
Enzymes [BR:
ccs01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
CCNA_02642
Peptidoglycan biosynthesis and degradation proteins [BR:
ccs01011
]
Precursor biosynthesis
Amino acid ligase
CCNA_02642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-GeneID:
7332744
NCBI-ProteinID:
YP_002518015
UniProt:
A0A0H3CAA4
LinkDB
All DBs
Position
complement(2794896..2796356)
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AA seq
486 aa
AA seq
DB search
MTKRLSDLFNRPFATDPVIAGVTADSRKVTTGWLFAALPGTKVDGRDFAEGAVAKGAAAI
LAPEGGLEGLGVPVVRSEDARRAYALAAAAFWGKQPAMCVAVTGTNGKTSVAGFCRQIFT
KLGHKAASMGTLGVVVSQPGQPDQQLTPPGLTTPDAGDVAEMIARLADMGVTHLALEASS
HGVDQRRIDGVKLSAAGFTNFTQDHLDYHGSMEAYRAAKLRLFDTLTPAGAMAVLNADSE
AFPDFAAAAVTSGQSVFSVGEEGQGLRLLSRTPTPAGQDLVVEAEGVVHHLKLPLAGAFQ
ASNVLVAAGLCIAAGEDSAKVLKALETLEGAAGRLQRVGRGPKGGEAYVDYAHTPDGLQT
VLEALRPHTAGKLIAVFGAGGDRDRGKRPLMGAIGAKLADIAIVTDDNPRSEDPASIRAA
ILEAAPGAREIGDRRAAIRAAVALMSEGDVLVVAGKGHEQGQIVAGVVHPFDDVAETLQA
LEGVDA
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaagactgtccgacctgttcaaccgtcccttcgcgacggatccggtgatcgcc
ggtgtcaccgccgacagccgcaaggtcacgaccggctggctgttcgccgctctgccgggg
accaaggtcgacggtcgcgacttcgccgagggcgcggtggccaagggtgcggcggcgatc
ctggcgccggaaggcgggctggaagggctgggcgtgccggtggtccgctcggaggacgcc
cgccgcgcctacgccctggccgccgccgccttctggggcaagcagccggcgatgtgcgtg
gccgtcaccggcaccaacggcaagacctcggtggccggcttctgccgtcagatcttcacc
aagctgggccacaaggccgccagcatgggcaccctgggtgtggtggtcagccagcccggc
cagccggaccagcaactgaccccgccgggcctgaccacgcccgacgccggcgacgtcgcc
gagatgatcgcgcgccttgccgacatgggtgtcacccatctggcgctggaggccagttcg
cacggcgtcgaccagcgtcgcatcgacggcgtcaagctgagcgccgcaggctttacgaac
ttcactcaggatcacctcgactatcacggctcgatggaggcctatcgcgccgccaagctg
cgcctgttcgacacgcttacccctgcgggagcgatggcggtgctgaacgccgacagcgag
gccttcccggacttcgccgccgccgccgtcacctcgggccagagcgtgttctcggtcggc
gaggaagggcaggggctgcgactgctgtcgcgtacgcccacgcccgccggccaggacctg
gtcgtcgaggccgagggcgtggttcatcacctcaagctgccgctggccggcgccttccag
gcgtcgaacgtgctggtcgcggcggggctctgcatcgccgccggcgaggacagcgccaag
gtcctcaaggctctggaaaccctggagggcgcagcgggccgcctgcagcgtgtggggcgc
ggccccaagggcggcgaagcctatgtcgactacgcccacacgcccgatggtctgcagacg
gtgctggaggccctgcgcccgcacaccgccggcaagctgatcgcggtgttcggcgcgggc
ggcgatcgcgaccggggcaaacggccgctgatgggcgcgatcggcgcgaagctcgccgat
atcgccatcgtcaccgacgacaatccgcgctcggaagatcccgcctcgatccgcgccgcc
attctcgaagccgccccgggcgcccgcgagatcggcgaccgccgcgccgctatccgcgcc
gccgtggcgctgatgagcgagggcgatgtgctggtcgtcgccggcaagggccatgaacag
ggccagatcgtcgccggcgtcgtgcatccgttcgacgacgtcgccgaaaccctgcaagcg
ctggagggcgtggatgcctga
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