Chryseobacterium cucumeris: JNG87_13025
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Entry
JNG87_13025 CDS
T10197
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ccuc Chryseobacterium cucumeris
Pathway
ccuc01501
beta-Lactam resistance
ccuc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ccuc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JNG87_13025
01503 Cationic antimicrobial peptide (CAMP) resistance
JNG87_13025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccuc03036
]
JNG87_13025
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccuc02000
]
JNG87_13025
01504 Antimicrobial resistance genes [BR:
ccuc01504
]
JNG87_13025
Chromosome and associated proteins [BR:
ccuc03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JNG87_13025
Transporters [BR:
ccuc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JNG87_13025
Antimicrobial resistance genes [BR:
ccuc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JNG87_13025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
Beta-barrel_RND_2
BSH_RND
BSH_CzcB
RND-MFP_C
BSH_CusB
Biotin_lipoyl
Beta-barrel_YknX
HH_MFP_RND
CzcB_C
BSH_YknX
HH_YBHG
HH_EMRA
DUF2118
BSH_Fcp1
BSH_YhbJ
BSH_LcnD
BSH_RND_rel
Motif
Other DBs
NCBI-ProteinID:
QRA41543
LinkDB
All DBs
Position
2902696..2903757
Genome browser
AA seq
353 aa
AA seq
DB search
MKKTLIYIIVAAVLVGLAAYKIAGNKEKQTQEVKEVAKQVDKINVNIVTVTRENIDTDYS
ANGTFIPKQEMNQSSEISGRIVSVLVKEGSRVGAGQVLATIKKDAIEVDVTQAQNNLQNA
IIDNQRYENAYKTGGVTKQQLDNSRLQLKNAQAAVRAQGVKVNDTSIRAGISGTINKKMV
EPGTVVSPGTSMFEIVNINSLKLSVLVDESQIGKIQLGQEVPIKVNVLPEDSFVGRITFI
APKSDASLNFPVEIEVQNRGNLKAGMYATAKFSTNNGAETQNMLTVPAEAFVNGVSSGQL
FIVQNGVAKLIKVTIGKVYGDKVQILSGLNGGEQVVTSGQINLDNGSKVNIVK
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaactttaatatatatcatcgtagcagctgtactggtaggtttagccgcttac
aagattgcgggtaacaaagaaaaacagacgcaggaagtaaaagaagttgccaagcaggta
gataaaatcaatgttaatattgtaaccgttacaagggaaaatattgatacagactactca
gccaacggaacttttattcctaagcaggaaatgaaccagtcttctgaaatatcaggacgt
attgtaagcgttctggtaaaagaaggttcaagggtaggagcaggacaggttttggcaacg
attaaaaaagatgctatcgaagtggatgttacccaggctcagaacaatcttcagaatgct
attattgataaccaacgctatgagaacgcatataaaacaggcggagttacaaaacaacag
cttgataactcaagactacagctgaaaaatgctcaggctgcagtaagagctcaaggtgtg
aaagtaaatgatacaagcatccgtgctggaatcagcggtactatcaacaagaaaatggtt
gaacccggaacggtggtttctcctggaacatcgatgtttgaaatcgttaatatcaacagt
ctgaaactttctgttttggtagatgaaagccagatcggaaaaatccagttaggtcaggaa
gttccgattaaagtaaatgttcttccggaagactctttcgtaggtagaattactttcatc
gctcctaaaagtgatgcttctctgaatttcccagttgaaatcgaagtacaaaacagagga
aaccttaaggctggtatgtatgcaacagctaaattcagtacaaacaacggcgcagaaact
cagaatatgctgacagtccctgcagaagcctttgttaacggagtaagctcaggacaatta
ttcattgttcagaatggtgttgctaaattgatcaaagtaaccatcggaaaagtttacgga
gataaagttcagattttaagtggattgaatggaggagaacaggtggtaaccagcggacag
atcaacctggacaacggatctaaagtgaacattgtaaagtag
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