Chryseobacterium cucumeris: JNG87_15235
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Entry
JNG87_15235 CDS
T10197
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
ccuc Chryseobacterium cucumeris
Pathway
ccuc01501
beta-Lactam resistance
ccuc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ccuc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JNG87_15235
01503 Cationic antimicrobial peptide (CAMP) resistance
JNG87_15235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccuc02000
]
JNG87_15235
01504 Antimicrobial resistance genes [BR:
ccuc01504
]
JNG87_15235
Transporters [BR:
ccuc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JNG87_15235
Antimicrobial resistance genes [BR:
ccuc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JNG87_15235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QRA41973
LinkDB
All DBs
Position
complement(3407365..3410526)
Genome browser
AA seq
1053 aa
AA seq
DB search
MFKKVIHRPVFAIVISVVILFMGGIAMKQLPTEQFPKIAPTTVAVSIAYPGASADVLVKS
SLITIENAINGVQGMRYITTDATSAGEATVNVVFDPGTDPNEAVVLVKTRVDQVMPLLPE
LVQKEGVVVNPIQPSMLMYVNLYSTNKSMDEKFLYNYSMVNIIPEINRIHGIAKSQILGS
RRYAMRIWLNPDRMRAYDISVDEVMKAIGEQSIIGRPGRIGQSSGIAAQSLEYVLTYKGQ
YNKPEEYENIIVRSNAEGENVKLKDIAKVELGSEFFDIYSNLDGHPSASIVLKQNYGSNA
NDVIRDVKAKLAEMKGNFPPGVDYKISYDVSQFLDASIEQVIHTLRDAFILVAIVVFIFL
GDWRSTLIPIIAVPVSLIGTFFVIQFFGLTINLVTLFALVLAIGIVVDNAIVVIEAVHAK
MEDSNISPYKAVKEVMGEIAGAIIAITAVMVAVFIPISFMTGPVGTFYRQFSITMASSIV
ISAVVALTLTPVLAAMLLKNHHGKPKKANIFTKALDSFNSGFDKVTGKYASFLRKIVSRK
VVTWGILIAFCAGIVMINKVLPGGFIPNEDQGTIYAIIQTPPGSTLEQTNKVSRTLQKIC
MGVNGVESVSSLAGYEIMTEGRGSNAGTCLINLKSWNDRDHSVKEIMEELEEKSKDLGAT
IEFFEPPAVPGFGSSGGFSMRLLDLNRTTDYQEFDKANKDFIAQLKKRKELSGVFTFFAA
NYPQYELVFDNNAAMQKGVSIGKAMDNLNILIGSTYEQGFIRFGQFFKVYVQSSPEFRRL
PTDIMNLYVKNDRDEMVPYSAFMTMKKTQGPNEITRYNMYNSAAIRGLPAAGYTTADAIQ
AINETAAKTLPHGYKVAWEGLSYDEAQRGNEAIYVFLVVLVFVYLVLAAQYESFLIPFAV
LCSLPVGVFGSFLLLKAMGLENDIYAQVGLIMIIGLLGKNAVLIVEFAVKRRQAGDSILE
AAVEGSKARFRPILMTSFAFIAGLVPLVFARGAGAIGNHTIGASSLGGMLIGTLFGVIVI
PGLYYIFAKWSDGKKMIKDEDESPLSEDMIHYE
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaaagtaatacaccgaccggttttcgccattgtgatatcggttgtgatcctg
tttatgggaggtatcgccatgaagcagcttcctacggaacagtttccaaaaattgcccct
accacagtagccgtttctattgcctatcccggcgcgagtgcagatgtattggtaaaatca
tctttaattacgattgaaaatgccatcaatggagttcagggaatgcgttacatcaccacc
gatgccaccagtgcaggagaagctactgtgaacgttgtcttcgatcccggaaccgatccg
aatgaggcagtcgttctggtaaaaaccagagtggaccaggtaatgcctttattaccggaa
ctggtacagaaagaaggagttgttgtcaacccgattcagcccagtatgctgatgtacgtg
aacctttacagcacgaataaaagtatggatgaaaaattcctgtacaactactctatggtg
aatatcatcccggaaattaaccgtatccacgggattgcaaaatcgcagatcctgggtagc
cgaagatatgccatgcgtatctggctgaaccctgaccgtatgcgtgcttatgacatctct
gtagatgaggtgatgaaagctatcggcgaacaaagtatcatcggacgcccggggagaatc
ggacaaagttccggtattgcagcacagtcactggaatatgtactgacttataaagggcaa
tacaacaaaccggaagaatatgaaaatattatcgtgcgttccaatgccgaaggtgaaaat
gtgaaactgaaagatattgccaaggtagagcttggaagtgaattctttgatatttattcc
aaccttgacgggcatccttctgcttccattgtattgaaacaaaactacggaagtaatgcc
aatgacgtgatcagagatgtgaaagcgaaactggcagaaatgaaagggaactttcctccg
ggtgttgattataaaatcagttatgacgtttcccagttccttgatgcttctattgaacag
gtgatacataccttaagagatgcatttattctggtggccattgtagttttcattttcctt
ggcgactggcgttctacgctgattcctattattgccgtgccggtttctttgatcggaact
ttctttgtgatccaattctttgggttaaccatcaaccttgttaccctttttgctttggta
ctggcgatcggtattgtggttgacaacgcgattgttgtcattgaggctgttcacgccaaa
atggaagacagtaatatttcgccttataaagcagtaaaagaagtgatgggtgaaattgcg
ggtgctattattgccattacagccgtgatggtagctgtgttcatccctatttcatttatg
acgggtccggtgggaactttctaccgtcagttttcgattactatggcgagttctattgtt
atttcagcggtagtagcccttacgctgactcctgttttagccgcaatgttattgaaaaac
caccatggaaagcctaaaaaagccaatattttcaccaaagctttagactcattcaatagc
ggttttgataaagtaaccggaaaatatgcttcattccttagaaaaatcgtaagccgaaag
gtggtaacatggggaattctgattgctttctgtgccggaattgtgatgatcaataaggtt
cttccgggcgggtttatcccgaatgaagaccagggaactatctatgccatcatccagact
cctccgggttctactttggagcagacgaataaggtttccagaacattgcagaaaatctgt
atgggagtaaacggtgtggaatctgtatcgtccctggcaggatatgaaatcatgactgaa
ggccgtggttcgaatgcaggaacatgtctgatcaaccttaaaagctggaacgaccgtgat
cattctgtgaaggagatcatggaagaactggaagaaaaatcaaaagaccttggagctacc
attgaattttttgaaccaccggctgtaccgggattcggatcttcgggaggtttctccatg
agattgcttgatctgaacagaactaccgattatcaggaatttgataaagccaataaagat
ttcatcgcacagcttaaaaagcgtaaggagctttcaggagtcttcaccttttttgcggct
aattatcctcagtacgagctggtttttgataataatgcagcgatgcagaaaggagtttct
atcggaaaagcgatggacaacctcaacattctgatcggtagtacctatgaacagggcttt
atccgtttcggacagttctttaaagtatatgtacagtcgtccccggaattcagaagactt
cctacagatatcatgaatctgtatgtgaaaaatgaccgtgatgaaatggtgccttattcc
gcattcatgacaatgaaaaagacacagggacctaatgaaatcacccgttacaacatgtac
aattctgctgcaatccgcggacttccggctgcagggtatacaacggcagatgctattcag
gctatcaacgaaacagcggccaaaacacttcctcacggatacaaagtggcatgggaagga
ttgtcttatgatgaggcgcaacgtggtaatgaagcgatctatgtattccttgttgttttg
gtatttgtgtatctggttctggcggcacaatatgaaagtttccttattccgtttgcggta
ctttgttcactcccagtcggagttttcggatctttcttattattaaaagcgatgggactt
gaaaatgacatctacgcacaggttggattgatcatgattatcggattactgggtaaaaac
gcagtgcttattgtagaatttgccgtgaaaagacgtcaggcaggagattctattcttgaa
gctgctgtagaaggttccaaagcccgtttcagaccgatcctgatgacttcttttgccttt
attgcaggattggttccgcttgtttttgcaaggggcgccggggccatcggaaaccatact
atcggtgcttcctcactgggcggaatgctgatcggaactttattcggagtgatagtaatt
cctgggctctactacatatttgccaagtggtctgatggtaaaaaaatgattaaagacgaa
gatgaatctccattaagcgaagacatgatccattatgaataa
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