KEGG   Chryseobacterium cucumeris: JNG87_15240
Entry
JNG87_15240       CDS       T10197                                 
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
ccuc  Chryseobacterium cucumeris
Pathway
ccuc01501  beta-Lactam resistance
ccuc01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:ccuc00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    JNG87_15240
   01503 Cationic antimicrobial peptide (CAMP) resistance
    JNG87_15240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccuc03036]
    JNG87_15240
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ccuc02000]
    JNG87_15240
   01504 Antimicrobial resistance genes [BR:ccuc01504]
    JNG87_15240
Chromosome and associated proteins [BR:ccuc03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    JNG87_15240
Transporters [BR:ccuc02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   JNG87_15240
Antimicrobial resistance genes [BR:ccuc01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    JNG87_15240
SSDB
Motif
Pfam: Beta-barrel_RND BSH_RND Biotin_lipoyl BSH_CusB RND-MFP_C YknX_C BSH_CzcB BSH_YknX Beta-barrel_RND_2 BSH_YhbJ WEMBL HH_CzcB HH_EMRA HH_MFP_RND BSH_LcnD BSH_ALG44
Other DBs
NCBI-ProteinID: QRA41974
LinkDB
Position
complement(3410542..3411627)
AA seq 361 aa
MVKKSLMYINLCLILLFVSCQSEKKEKTEAASFNVTSPLIKDTLVNKDYVAQIRSINHIE
LRAQEKGYIQSIYVDEGQFVQKGQLLFKIMPNLYESDVNRAKAESKYAQIEYQNTKNLSD
KNIVAPQEMAMAKARYEKALAELASMNTHLKFTEIRAPFNGIVGKLHVRKGSLVDEGELV
TELSDNSKMWVYFNVPEAEYLNQMDAKKDNNPMHVRLRMANGKEFTQDGIVQTIESDFDN
ETGNIAYRATFPNPKGLLRYGETGNIVITSPYANAMMIPQKATFEELEKKYVYVIGKDGK
VHAREIKVAAELPHIYVVASGLGKDDRILLEGLRMVQENQKISSKYQKPEKVMSNLDLYA
E
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggtcaagaaaagtctcatgtatatcaacttgtgccttattctcttgtttgtaagctgt
caatctgaaaaaaaggaaaaaacagaagcagcgtcattcaacgtaacaagcccgcttatc
aaagatactttggtgaacaaagattatgttgcgcaaatccgttctattaatcatattgag
cttcgagcccaggaaaaaggatacatccagtctatttatgtagatgaaggacagtttgta
caaaaagggcagctgctgttcaaaatcatgcctaatctttatgaatctgatgtaaaccgt
gccaaagcggaatccaaatacgcgcaaatcgaatatcagaataccaaaaacctttctgac
aaaaacattgttgcccctcaggaaatggctatggctaaagcaaggtatgaaaaagcactg
gccgaacttgcttcaatgaatacccatttaaaatttaccgaaatccgtgctcctttcaat
ggaattgtaggaaagctacacgtacgtaaaggaagccttgtagatgaaggcgagcttgta
actgaactttccgacaacagcaaaatgtgggtatatttcaatgtaccggaagctgaatat
cttaatcagatggatgccaaaaaggataataatccaatgcatgtacgtttaagaatggcc
aatggcaaagagtttacgcaagatggtattgtacaaaccatagagtctgattttgacaat
gaaaccggaaatatcgcttacagggctacttttccgaacccgaagggactgctgagatac
ggagaaaccggaaacatcgttatcacctctccttatgccaatgcaatgatgattccacag
aaggccactttcgaagagctggaaaagaaatatgtctatgtgatcggtaaagatggtaag
gtacatgcaagagaaataaaagttgctgctgaattaccgcatatttatgtcgtcgcttca
gggcttggaaaggatgacagaatccttttggaagggcttagaatggttcaggaaaaccag
aagatcagctcaaaataccaaaagcctgaaaaagtaatgtcgaacctggatctgtacgcc
gagtaa

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