Campylobacter cuniculorum: CCUN_0882
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Entry
CCUN_0882 CDS
T05046
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ccun
Campylobacter cuniculorum
Pathway
ccun03030
DNA replication
ccun03410
Base excision repair
ccun03420
Nucleotide excision repair
ccun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCUN_0882 (ligA)
03410 Base excision repair
CCUN_0882 (ligA)
03420 Nucleotide excision repair
CCUN_0882 (ligA)
03430 Mismatch repair
CCUN_0882 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccun03032
]
CCUN_0882 (ligA)
03400 DNA repair and recombination proteins [BR:
ccun03400
]
CCUN_0882 (ligA)
Enzymes [BR:
ccun01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CCUN_0882 (ligA)
DNA replication proteins [BR:
ccun03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CCUN_0882 (ligA)
DNA repair and recombination proteins [BR:
ccun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CCUN_0882 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCUN_0882 (ligA)
MMR (mismatch excision repair)
DNA ligase
CCUN_0882 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CCUN_0882 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
PTCB-BRCT
HHH_5
Nlig-Ia
BRCT_2
DNA_ligase_ZBD
SeqA_N
RPA_interact_C
Motif
Other DBs
NCBI-ProteinID:
ARJ56493
UniProt:
A0A1W6BWK5
LinkDB
All DBs
Position
875732..877681
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AA seq
649 aa
AA seq
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MTRQEYLEKITQANEWAQAYYNKDDPLASDEEYDALIKQLRAFEEQNPTQIAPNSPTQKI
APTLQSEFHKIPHLSKMWSMEDVFNETELRAWAKRANCEKNFFIEPKFDGASLNLIYENG
KLISGATRGDGEVGEDITLNVLEIENIPKTIAYKEKIEIRGEIVILKKDFNSINEQRIKE
NQNPFANPRNAASGSLRQLDTSITKERNLKFYPWGVGENTLSFKKHSEVMNFIRELGFLK
DDFIRLCANLDEVLTSYKELLSLREQKAMMMDGMVVRIDDIELCNELGYTVKFPKFMAAF
KFPALEKTTRLLAVNLQVGRSGVITPVAALEPVNLDGVIVKSATLHNFDEISRLDVRIND
FVNVIRSGDVIPKITKVFKDRRDGLEQEIVRPQLCPVCQNELLDEKTMIKCQNLDCKARL
VNSIIHFVSKKCLNIDGLGENIVELLYEKGKISTLESIFHLKYEDFENLEGFKEKKITKL
LKAIEDSKTCELYRFITALGIEHIGEVAAKKLAKTFGKMWHKQGFEDYKNLEGFGEEMAK
SLEEFSRVNLQRIDDFYILLNLSEEKSEVVEQSPIKDKIFVITGTLSRPRDEFKALIEKF
GGKVSSSVSKKTSFVLFGKEAGSKLDRAKELNLVCLSEEEFNQMLHNAL
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgacaagacaagaatatttagaaaaaattactcaagctaatgagtgggctcaagcatat
tataacaaagatgaccctctagcaagcgatgaagaatacgatgctttaataaaacaatta
agagcctttgaagagcaaaaccccactcaaattgctcctaattcacccacacaaaaaatt
gctccgactttacaaagcgaatttcataaaataccgcatcttagcaaaatgtggtctatg
gaggatgttttcaatgaaactgaactaagagcttgggctaagagggcaaattgtgaaaag
aattttttcatcgagcctaaatttgatggggcaagtcttaatctcatctatgaaaatggc
aaacttataagcggtgctactcgtggagacggcgaggttggcgaggatattactttaaat
gttttagaaatagaaaacatcccaaaaactatagcttataaagaaaaaatcgaaattaga
ggcgagattgtgattttaaaaaaggattttaatagcattaatgagcaaagaatcaaagag
aatcaaaatccttttgcaaatcctagaaacgctgcaagtggaagtttaaggcagcttgat
acaagcatcacaaaagaaagaaatttgaaattttatccttggggggtgggtgaaaatact
ttaagctttaaaaaacacagcgaagtgatgaatttcataagagagcttggctttttaaaa
gatgattttataaggctttgtgcgaatttagatgaggttttaacttcttataaagagctt
ttaagcttaagagaacaaaaagctatgatgatggatgggatggttgtaagaatcgatgat
atagaactttgcaatgagcttggttatacggttaaatttcctaaatttatggcagctttt
aaatttccagctcttgaaaaaacgacgcgtttgttggctgtgaatttgcaagttggtagg
agcggagtgattacgcctgtggcggcgttagaacctgttaatttagatggggtgattgta
aaatccgcaactcttcataattttgatgaaatttcaaggcttgatgtgaggattaatgat
tttgtgaatgtgattagaagcggagatgtgattccaaaaatcactaaagttttcaaagac
agacgcgatggcttagagcaagaaattgtgcgtccacagctttgtcctgtatgtcaaaat
gagcttttggatgaaaaaacgatgataaaatgccaaaatttggattgtaaagcaagactt
gttaattctatcatacattttgtgtctaaaaaatgccttaatatcgatggattgggagaa
aatatcgtagagcttttatatgaaaaaggtaaaatcagcactttggagagcatttttcat
cttaaatatgaggattttgaaaatttagaaggttttaaagaaaagaaaatcactaagctt
ttaaaggcgattgaagattcaaaaacttgcgaactctatcgttttatcacggctttgggc
atcgaacacattggtgaagttgcagctaagaaacttgcaaaaaccttcggcaaaatgtgg
cataaacaaggctttgaggattataaaaatctcgaaggctttggagaggaaatggcaaag
agtttggaggaatttagccgtgtgaatctgcaaagaattgatgatttttatattttattg
aatttaagcgaagaaaagagtgaagttgtggagcaaagtcctattaaggataagattttt
gtgattacaggcacactttcgcgtcctagagatgagtttaaagctttgattgaaaaattt
ggtggaaaggtcagctcttcagtgtctaaaaaaacttcttttgtgctttttgggaaagag
gcgggttcaaaacttgatagggctaaagaattaaatcttgtttgccttagtgaagaagaa
tttaaccaaatgcttcacaatgcgttatga
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