Campylobacter curvus: CCV52592_1565
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Entry
CCV52592_1565 CDS
T00576
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ccv
Campylobacter curvus
Pathway
ccv03030
DNA replication
ccv03410
Base excision repair
ccv03420
Nucleotide excision repair
ccv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCV52592_1565 (ligA)
03410 Base excision repair
CCV52592_1565 (ligA)
03420 Nucleotide excision repair
CCV52592_1565 (ligA)
03430 Mismatch repair
CCV52592_1565 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccv03032
]
CCV52592_1565 (ligA)
03400 DNA repair and recombination proteins [BR:
ccv03400
]
CCV52592_1565 (ligA)
Enzymes [BR:
ccv01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CCV52592_1565 (ligA)
DNA replication proteins [BR:
ccv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CCV52592_1565 (ligA)
DNA repair and recombination proteins [BR:
ccv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CCV52592_1565 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCV52592_1565 (ligA)
MMR (mismatch excision repair)
DNA ligase
CCV52592_1565 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CCV52592_1565 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_5
HHH_2
PTCB-BRCT
DNA_ligase_ZBD
Nlig-Ia
BRCT_2
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
EAU00654
UniProt:
A7GXS4
LinkDB
All DBs
Position
736925..738889
Genome browser
AA seq
654 aa
AA seq
DB search
MENFMRIDSKESYENAVATLNAWAKAYYDDDAPIASDEEYDALYHEVLAYEQVNPAQKSL
FSPTTRIGGGVSEGFSKARHIKQMWSMEDIFSQLELVAWLKRGEKQNLSFVAEPKFDGAS
LNLLYEKGMLVRAITRGDGITGEEVTQNARVIKSIPLNISYDGRIEIRGEVVIKKADFDA
INEERTRNGETLLSNPRNAAAGSLRQLDSAVTAKRKLLFIPWGVGEQNLGLAKHSEVMKF
VRDLGFYRDDFFKILDADGLAGAYNELLKQRDEKDVMMDGMVIRVDDLARCEELGYTVKF
PKFMVAFKFPAIEKTTRLLDVALQVGRSGVVTPVGVLDEVVIDGARVKSATLHNFDEIER
LGVMKNDLISIIRSGDVIPKITSVFKERRDGTQTPIIRPKFCPECGSHLLDEGVFIKCQN
LNCRARVINSIIHYASKKCLNIDGLGEAIINLLYEKGLISRVIDIYSLKFEDLMALEGFK
DKKAQNLLDAIEASKGASLARFITGLGCEHIGEVAAKKIAQNFGEGWLEADFDEVKNLEG
FGEEMANSLMDFIEVNKDEILALQSIVRPSFERKQITQNAFSGKSVVITGTLSRPRDEIK
AELEGYGAKVVGSVSKKTDFVLAGSNAGSKLQKAVELGVRVIDEGEFERLKLEI
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattttatgcgaatcgattcaaaagagagctatgaaaatgcggtggctacgcta
aatgcgtgggcgaaggcctattacgacgacgacgcgccgatagccagcgacgaggagtac
gacgctctttaccacgaggtcctggcctacgagcaggtaaatcccgcccaaaaatcgcta
ttctcgccgactaccaggataggcggaggcgtcagcgaaggctttagcaaggctaggcac
atcaagcagatgtggagcatggaggatatttttagccagttggagcttgtcgcgtggcta
aaacgcggtgagaagcaaaatttaagctttgtagccgagccgaaatttgacggagcgagc
ctaaatttactctatgaaaagggcatgctggtaagggccataacgcgcggagacggcatc
acgggcgaagaggtcacgcaaaacgctcgcgtgataaagtctatcccgctaaacatctct
tacgatggccgcatcgagatccgcggcgaggtcgtcataaaaaaggccgattttgacgcg
ataaacgaggagcgcacgcgaaacggcgagaccctgctctcaaaccctagaaatgcggct
gcaggcagcttgcgacagctagatagcgccgtgacagccaaaagaaagctacttttcatc
ccttggggcgtgggcgagcaaaatttagggcttgccaagcatagcgaagtgatgaaattc
gtacgcgatcttggcttttatagggatgatttttttaaaattttggacgccgacggtctg
gcgggcgcttataacgagcttcttaaacagcgcgacgaaaaggacgtgatgatggacggc
atggtgatccgcgtggacgatctggcgcgctgcgaggagctgggctacacggtgaaattc
ccaaaatttatggtcgcgtttaaattccccgcgatcgaaaaaaccactaggctgcttgac
gtggcacttcaggtaggcagaagcggcgtcgtgacgcctgttggcgtgcttgatgaggtc
gtcatcgacggagcgcgcgtgaaatcagccactttgcataactttgacgagatcgagcgc
cttggcgtgatgaaaaacgatcttataagcatcatccgctcaggagacgtgataccaaag
ataacaagcgtctttaaagagcgtagagacggcacgcaaacgccaataatacggccaaaa
ttttgccccgagtgcggctcgcatctgcttgacgagggcgttttcataaagtgtcaaaat
ctaaactgccgcgctcgcgtgataaactcgatcatacattacgcctccaaaaaatgccta
aacatcgatgggctgggcgaggcgatcataaatttgctctatgaaaaagggttgatatct
cgcgtcatcgatatatattcactaaaatttgaggatctgatggcgcttgaaggctttaaa
gacaaaaaggcgcaaaacctgcttgacgcgatagaggcgagcaagggcgcgagtctagcg
cgcttcatcaccgggcttggctgcgagcatatcggcgaggtggcggctaaaaagatcgcg
caaaatttcggcgagggctggctggaggccgactttgacgaggtaaaaaatttagagggt
tttggcgaggagatggcaaatagcttgatggattttatagaggtcaataaagatgaaatt
ttggccctgcaaagcatcgttcgtccgagctttgagcgcaagcagatcacgcaaaacgcc
tttagcggcaaaagcgtcgtgataacgggcacgctaagccgaccaagagacgagatcaaa
gccgagcttgagggctacggcgcaaaggtagtaggctcggtctctaaaaaaacggacttc
gtgctggcaggaagcaacgccggaagcaagctgcaaaaagccgtggagcttggcgttcgc
gtgatcgacgagggcgagtttgagaggctgaagcttgagatttga
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