Corvus cornix (hooded crow): 104683198
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Entry
104683198 CDS
T03546
Symbol
RNF123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123 isoform X1
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccw04121
]
104683198 (RNF123)
Enzymes [BR:
ccw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104683198 (RNF123)
Ubiquitin system [BR:
ccw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104683198 (RNF123)
Multi subunit type E3
KPC complex
104683198 (RNF123)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
DUF7050
Motif
Other DBs
NCBI-GeneID:
104683198
NCBI-ProteinID:
XP_039414852
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All DBs
Position
12:3460905..3508778
Genome browser
AA seq
1321 aa
AA seq
DB search
MTSRGAGTAFSRKNYRLSTEPEKSKVTGIVNSRLLNDYLHRVFTSADGNQPAAAYRKHLT
FQNLQEHLERLLAEENGSEESRDQVAEGRLGPSTVVLDHTSGFEGLLLVDDDLLGVIGHS
NFGSIRATTCVYKGKWIYEVLISSQGLMQIGWCTLNCRFNQEEGVGDTPDSYAYDGNRVR
KWNVTTTNYGKSWAAGDIVSCLIDLDEGTIAFCLNGISLGTAFDNITRGAGMAYFPAISL
SFKESVAFNFGSRPLRYPVEGYRPLQDPPVADLVKARKLLGYLKNVIHIGIDVTEGKLVE
KDTSMWQLQGEPTMLITLAHIFNYFSPLMCKVYLVEDVLMTFLLSILERGGAVESHPLIQ
QLLDLMWLLMEEYEVHECLKQLLMSLLRAYRFSPIIPDLGLQIHYLRLTIAVLKHEKSRK
YLLSNVLFDVLRSVVFFYIKSPLRVEEAGLQELIPTTWWPNRFTKEGKESKEVKEESAEE
RLRRRAYERGCQRLKKRIEVVEGLQVQILKLLLNNKDRGGGEASRYIFLNKFRKFLQENA
SNRGNLTVLCPPEYMVCFLHRLIAALRFFWDGHKAKTPAALSSEEAYVPPQLFYNGKVDY
FDLQRLGGLLSHLKKTLKDDLAAKANILIDPAELQAVTMDDLDEDEESATSAAQSQRPSA
ALAIGGALARPAWLSSPTLGRANQFLSTAAVSLMNPRRPLGTLEKIKVLTLRVEQRTRED
IEGTHGNEGLLLGRPPEEPDQPITENSLLEVLDGIVMMYNLSVHQQLGKMVGVSDDVNEY
AMALKDTEEKISRCPKRRRDIHEELLKSQKVFSEKLNHLSRRLAWINVTIYSKEKMQDIY
WLLRVCIRTIEHGDRTGSLFAFMPEFYLSVAMNSYSALKNYFSPVNSMEELPGYEETLMR
LAAILAKHFADSRIVGTDIRDSLMQALASYVCYPHSLRAVERIPEEQRISMMKNLLAPYE
QRPWAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDASLPSLQRDLSVASFQKPCPSTL
LQRHMADLLRSDRDLAPSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKV
CATCFDLSVSLLRVLEMTVTLAPEIFLDWNRPSSELLLRRLAQLLNQVLNRVTAERNLFD
RVVNLRLPGLESVDHYPILVAVTGILVRLLVDTDVQGTERATAVLLADPCFQLRSIQYLL
GHAEPSALAAAAPATDKRHFSLHTFCPPDTEYISAEELAKVEKMLNHLSEESKQAAATTL
PTSEEDLCPICYAHPISAIFRPCSHKSCKACINQHLMNNKDCFFCKATITGVDDFTKPAS
S
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgagaggtgctgggactgctttctcaaggaagaattacaggctgagcactgag
ccagagaagtccaaggtcacagggatcgtgaacagcaggctgctgaatgattatctgcat
cgagtctttaccagtgctgatgggaaccagcctgcagctgcttacaggaagcacctgacg
ttccagaacctgcaggagcaccttgagcgattgctggcagaggagaatggctctgaagaa
agtagagatcaggtagcagagggccggctcggtccctccactgtggtgctggaccacacg
agcggctttgagggactcctgctggtcgatgatgacttgcttggggtgattggccacagt
aactttgggtccatcagggccacaacatgtgtgtataaagggaaatggatttatgaggtg
ctcatctcctcccagggactcatgcagattggctggtgtactctcaactgcagatttaat
caggaggagggcgttggggacacgccagattcgtatgcctatgatggcaacagagtgcgc
aagtggaacgtgactactaccaactatggcaaatcctgggcagcaggagacatcgtcagc
tgtctgatagaccttgatgagggcaccattgctttctgcttgaacggcatatctctggga
actgcctttgataacatcacgaggggtgctggcatggcttatttccctgccatcagcctc
tccttcaaagagtctgttgcttttaacttcggaagccgtccgctccgttatccagtggaa
ggttaccggcccttgcaagatcctcctgtggcagacctggtgaaggctcggaagctgttg
ggctacttgaagaatgtgatccatattggaatagatgtgacggaggggaagctggtggag
aaagacacatccatgtggcagctgcagggagaacccacaatgttgattacattagctcac
atcttcaattatttctcccctcttatgtgcaaggtgtacctggtggaagatgtactcatg
accttcctgttgagcatccttgagcgaggaggggcagtggagtcccacccccttattcag
cagctgctggatctcatgtggcttcttatggaggagtatgaagtgcatgagtgcctcaag
cagctgctgatgtccctgctgcgggcttacaggttctctcccatcatcccagacctggga
ttacaaatccactacctccggctcaccattgcagtcttgaagcacgagaaatctaggaaa
tacctactcagcaatgttctcttcgacgtgctgcgttctgttgtgttcttctacatcaag
agcccgctgcgtgtggaggaggcaggtttgcaggagctcattcccaccacgtggtggcca
aaccgcttcaccaaggagggcaaggagagtaaggaggtgaaggaggagagtgctgaggag
agattgaggcgtcgagcatatgaaagaggctgccagcggctcaagaaacgcattgaagtg
gtggaaggcctccaggttcagattctgaagttgctgctgaacaacaaggacagaggaggg
ggagaagcctccagatacatcttcctaaacaaattccgcaagtttcttcaagaaaacgct
agcaacagagggaacttgactgtgttgtgcccaccagagtacatggtgtgcttcctgcac
cggctcatcgctgccctgcgcttcttctgggatggccacaaggcaaagaccccagctgcc
ctgagcagtgaagaagcctatgtccctcctcaactcttctataatgggaaggtggattat
tttgaccttcagcgacttggaggtcttctgtctcatcttaagaagactctgaaagatgac
ctggctgcaaaagccaacatcctgatcgaccctgcagagctgcaggcagtaactatggat
gatcttgatgaagatgaggaatcagcaacatcagcagcacagtcccagcgcccctctgcc
gccctggccattggtggagctcttgccaggcctgcctggctcagttcccccaccctgggc
cgtgccaaccagttcctgagcacggcagccgtcagcctgatgaacccgcggcggcccctg
ggcaccctggagaagatcaaagtgctcacgctgcgcgtggagcagcgcacaagggaggac
attgaaggcacccatggaaatgagggtctcctactgggcagacccccagaagagccagac
cagcccatcaccgagaactccctcctggaagtcctggatgggatagtgatgatgtacaac
ctcagtgtccaccagcagcttgggaagatggttggtgtgtcagatgatgtgaatgaatat
gccatggcactgaaagacacagaggaaaaaatcagccgctgccctaagaggaggagagac
atccatgaggaactgctgaagagccaaaaggtcttctccgagaagctcaaccacctgagc
cggcgcctcgcttggataaatgtcaccatttattcaaaggagaagatgcaggatatctac
tggctgctgcgagtgtgcatccgcaccatcgagcacggggacaggacgggctcgcttttc
gctttcatgccggaattctacctcagcgtggctatgaacagctacagtgcactcaagaac
tacttcagccctgtcaacagcatggaggagctcccaggctacgaagagaccctgatgcgc
ctcgctgccatcctggccaagcattttgctgactcaaggattgtgggcacagacatccgg
gactccctgatgcaggcgttggccagctacgtctgctacccgcactcgctgcgtgctgta
gagaggatcccagaagagcagcggatctccatgatgaaaaacctcctggctccctatgag
cagcgaccctgggcacagaccaactggatcctcgtcaggctgtggcggggctgtggcttt
gggtacagatacacacggctcccacacctgctgaaaaccaagcctgaggatgccagcctc
cccagcctgcagagagatctctctgttgctagtttccagaagccgtgtccatccaccttg
ctgcagcggcacatggcagacctgctccgcagcgaccgcgacctggcccccagcttcctc
aacagtgtcctgaaccagctgaactgggcgttctctgagttcatcggcatgattcaggag
atccagcaggcagcagagcgcctggagaggaactttgtggacagccgccagctgaaggtg
tgtgccacctgctttgacctgtcagtgagtctgctcagggtgctggaaatgaccgtcacg
ctggcgccggagatcttcctcgactggaatcgcccgtcgtcagagctgctgcttcggagg
cttgcccagctgttgaaccaggtgctgaaccgtgtgacagctgaaaggaacttgtttgac
agagtggtcaacctccgtctgccggggctggagagcgtggaccattacccaatcctggtg
gctgtgacagggatactggtccggctgctggtggacactgatgttcaggggaccgagcgc
gcgaccgcggtgctgctggcggatccctgcttccagctgcgctccatccagtacctgctg
ggccacgccgagccctcggccctggcagcggctgccccagccacggacaagcgccacttc
tccctgcacaccttttgccccccagacacagagtatatcagtgctgaggagctggcaaag
gtggaaaagatgctgaaccatctgagtgaggagtccaagcaggcggctgctaccacactg
cccaccagtgaggaagacctgtgccccatctgctacgcacaccccatctcggccatcttc
aggccctgctcccacaagtcatgcaaagcctgcatcaaccagcacctgatgaacaacaag
gactgcttcttctgtaaggccaccatcacgggggtggatgacttcaccaagccagccagc
tcctag
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