Corvus cornix (hooded crow): 104683404
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Entry
104683404 CDS
T03546
Symbol
IFT122
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X3
KO
K19656
intraflagellar transport protein 122
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccw03037
]
104683404 (IFT122)
Cilium and associated proteins [BR:
ccw03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
104683404 (IFT122)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_IFT122_2nd
Beta-prop_IFT122_1st
Zn_ribbon_IFT122
Zn_ribbon_IFT122_C
TPR_IF140-IFT172
Beta-prop_EML_2
TPR_GEMI5
TPR_IFT80_172
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
TPR_7
EIF3I
Beta-prop_RIG_2nd
ANAPC3
WD40_Prp19
Beta-prop_HPS5
TPR_COPA_B
TTC7_N
Beta-prop_IFT140_2nd
PEP5_VPS11_N
Zf_2nd_IFT121
Motif
Other DBs
NCBI-GeneID:
104683404
NCBI-ProteinID:
XP_020439318
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All DBs
Position
12:20549264..20580999
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AA seq
1034 aa
AA seq
DB search
MFNGIVSIRNKNGDEKVKIERPGGSSSPIWSICWNPSRDERNDILAVADWGQKLSFYHLS
GKQIGKDRVLNFDPCCISYFTKGEYLLLGGSDRQVSLFTRDGVRLGTVGEQSSWVWTCKV
KPDSNYVAVGCQDGTISFYQLIFSTVHGLYKDRYAYRDNMTDVIVQHLITEQKVRIKGRE
LVKKIAIYKNRLAIQMPEKILIYELYSDDSADMYYRVKEKIIKKFECNLLVVCSNHIILC
QEKRLQCLSFSGVKEREWLMESLIRYIKVIGGPPGREGLLVGLKNGQILKIFVDNALAIV
LLKQSTAVRCLDMSASRNKLAVVDENDTCLVYDIHTKELLFQEPNANSVAWNTQCEDMLC
FSGGGYLNIKASNFPVHQQKLQGFVVGYNGSKIFCLHVFSMSAVEVPQSAPMYQYLERKM
FKEAYQIACLGVTDADWRELAMEALEGLEFETAKKAFTRVRDLRYLELISSIEDRKKHGE
NNNDLFLADVYAYQGKFHEAAKLYKRSGHENLALEMYSDLRMFDHAKEFLGSGDPKDTKM
LIKKQADWAKDINEPKAAVEMYLSAGEHMKAIEISGDHGWVDMLIEIARKLDKAEREPLA
KCAFYFKQLDNPGHAAETYMKVGDLKALIQLHVETHHWEEAFALSEKHPEFKDEVYVPYA
QWLAENDRFEEAQKAFHKAGRQREAVRVLEQLTHNAVVESRFNDAAYYYWMLSMQCLDIA
QENEGQQTEMLQKFHHFQHLAEVYHVYHFIQRYTEEPFSFHLPETLFNISRFLLHSLTKE
TPLGISKVNTLLALAKQSKALGAYKLARHAYDKLQGLQIPERFQKSVELGSLTIRSKPFH
DSEELVPLCYRCSTNNPLLNNLGNVCINCRQPFVFSASSYEVLHLVEFYLEDGITDEEAV
ALIDLEAPRASKRENKWQEMMSDHAQSLRLDDSTGIIEDDDPFTAKLSFEQGGSEFVPVV
VSRAVLRSMSRRDVLIKRWPRPLRWQYYRSLLPDASITMCPSCFQMFHTEDYELLILQHN
CCPFCRRRIDESNQ
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatggcattgtcagcataaggaacaaaaatggtgatgagaaagtgaaaatagag
cggccagggggctcttcctctccaatatggtcaatttgttggaatccttccagggatgaa
cgcaatgacattttggctgtggcagattggggtcagaagctttccttttaccatctgagt
ggcaagcagattgggaaggacagagtgctcaattttgacccatgctgcatcagctacttt
actaaaggagagtatctcctactgggaggttcagatagacaagtttctctcttcacaagg
gacggcgtacgcctgggcactgtgggagagcagagcagctgggtgtggacctgcaaagtt
aaaccagactccaactatgtggcagtaggatgtcaggatggaacaatctccttctaccag
ctgatattcagcactgtccatggcctctataaagatcgctacgcctacagggacaacatg
accgatgttattgtccagcatctcatcacggaacaaaaagttaggataaaaggcagagag
cttgtgaagaaaattgcaatctacaaaaacagattagccatccagatgccagagaaaatc
ctgatttacgagttgtactcggatgactctgcagatatgtactatcgggtgaaggaaaag
atcataaagaaatttgaatgtaacttgctggtggtgtgttcaaatcacattattttatgc
caggagaagagactgcagtgcctctcattcagtggtgttaaagaacgagaatggctgatg
gaatctctcattcgttacattaaagtaattggagggcctccaggaagagaaggcctctta
gttggtctgaagaatggtcagatcctgaagatcttcgtggacaacgccttggcgatcgtg
ctgctgaagcaatccacagccgtgcgctgcctggacatgagcgcgtcccggaacaagctg
gccgtggtggatgagaacgacacctgcctcgtctatgacattcataccaaagagttgctg
tttcaggaacccaatgctaatagcgtggcctggaatacccagtgtgaggatatgctttgc
ttttctggagggggttacctcaatatcaaagctagcaacttccccgtccaccagcaaaaa
ctgcaaggctttgttgtgggttacaatggctccaagatcttctgccttcatgttttctct
atgtcagcagttgaagttccgcagtctgcacccatgtatcaatatctggaaagaaaaatg
tttaaagaagcctatcaaattgcctgtttaggagtgactgatgctgactggagagagctg
gccatggaagccttggaagggctggagtttgaaactgctaaaaaggcatttaccagggta
cgagaccttcgatatttagaactgatcagcagcatagaggaccggaaaaagcatggagag
aacaacaatgacctgttcctggcagatgtttatgcctaccaggggaaattccatgaggca
gcgaagctgtacaaaaggagtggccatgaaaacctggctctcgagatgtactctgaccta
cgcatgttcgaccatgcaaaggaatttctgggatctggagatcccaaagacacaaagatg
ctgataaaaaaacaagcagactgggccaaggatatcaatgagccaaaggcagcagtggag
atgtacctctctgctggcgagcacatgaaggccatcgaaatcagcggggaccacggctgg
gtggatatgttaatcgaaattgctcgaaaactggataaagctgagcgtgagcctttggcc
aaatgcgccttctattttaagcaacttgataaccctggccatgctgcagaaacctacatg
aaggttggtgacctgaaagcattgatccagctccacgtggagactcatcactgggaagaa
gcatttgctctgagtgaaaagcatcctgaattcaaagatgaagtctatgtcccttatgct
cagtggctggcagagaatgatcgatttgaagaagcccaaaaagcgtttcacaaggctggc
aggcagagagaggctgtgagggtgctggagcagttaacgcacaacgccgtggttgaaagc
cgatttaatgatgcagcctattattactggatgctttccatgcagtgcttagacatagcc
caagagaacgaaggacagcagactgaaatgttgcagaagtttcatcacttccagcatttg
gcagaagtttaccatgtctatcactttattcaaagatacactgaggagcctttcagcttc
cacttgcctgaaaccctcttcaatatttccaggtttctgcttcacagcttaacaaaggag
actcctttggggatctcaaaagtcaatacattattggccctggcaaagcagagtaaagct
cttggtgcatataaattggctcgtcatgcctatgacaagctgcagggactgcagatccca
gagaggttccagaaatccgttgagctgggcagcctgacaatccggtccaagccattccat
gacagtgaagagctcgtgcccctgtgttacaggtgctccaccaacaaccctttgctgaat
aacctggggaatgtctgcattaactgcagacagcctttcgtcttctcggcctcctcctat
gaggtgctgcacctggttgagttctatttggaagatggcatcacggatgaagaagctgta
gctctcattgatcttgaagctccaagagcgagtaaaagagagaataaatggcaagagatg
atgagtgaccatgctcagagtttgagacttgatgacagtacaggtattattgaggatgat
gatccctttacagcaaaactgagctttgagcaaggaggctccgagtttgtcccagtggtg
gtgagccgtgccgtgctccgctccatgagccgcagggacgtcctgatcaagcgctggccg
aggccgctgcggtggcagtactaccgctcgctgctgcccgacgcctccatcaccatgtgt
ccatcctgctttcagatgtttcacacagaagactatgagctcctcatactccagcataat
tgttgtccattctgtcggcggagaatagatgagtcaaaccaatga
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integrated database retrieval system
