Corvus cornix (hooded crow): 104684195
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Entry
104684195 CDS
T03546
Symbol
TIAM1
Name
(RefSeq) T-lymphoma invasion and metastasis-inducing protein 1 isoform X3
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04530
Tight junction
ccw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
104684195 (TIAM1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
104684195 (TIAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccw04990
]
104684195 (TIAM1)
Domain-containing proteins not elsewhere classified [BR:
ccw04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
104684195 (TIAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
Tiam_CC_Ex
RhoGEF
PH
RBD
PH_9
PDZ
PDZ_2
SOS1_NGEF_PH
PDZ_6
RNA_pol_Rpc82
PH_11
Motif
Other DBs
NCBI-GeneID:
104684195
NCBI-ProteinID:
XP_010389695
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All DBs
Position
1:203101..361257
Genome browser
AA seq
1589 aa
AA seq
DB search
MFVLLMMSDRDAMGNAESQSVEHAFYGDKQPGLGRKHTSRSLRLSSKASRRMRHASSGKI
IHRNSEVSTRSSSTPSIPQSLAENGLEPFAAEANLEDFGSPMWVERVDMGLRPVSYHTDS
SVTPSVDSSTVLTAASVHSMPDSEESRLYGDEPPFLAEGDGRALRYAANGTAFMDAASFK
KKRSKSADIWREDSLEFSLSDLSQEHLTSNEEILGLAEEKDAEAAQGPDAGGSPQPLVAC
QRANSMSDLYSPKTPGAAINGGPRNAFGGYCRNLVSDIPELGSHKMASVTAEDAPSSYSN
YNTLPCRKSHCLSEGATNPQMSHSSSMQGRRAKTTQDVNAGEGSEFTDSGIEGAATDTDL
LSRRSNATTASYSPPASRAFIGSDSGSSSAGDGLRQGVYENFRRELEMSTANSEHLEEAG
SALSDEQSSGTLSSPGQSDILLTAAQGTVRKAGALAVKNFLVHKKNKKVESATRRKWKHY
WVSLKGCTLFFYETDGRSGIDHNSIPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAF
LFQTCSQTELENWITAIHSACATAVARQHHKEDTVKLLKTEIKKLEQKIDMDEKMKKMGE
MQLSSVTDSKKKKTILDQIFVWEQNLEQFQMDLFRYRCYLASLQGGELPNPKRLLAFASR
PTKVAMGRLGIFSVSSFHALVAARTGESGVRRRTQAMSRSASKRRSRFSSLWGLDTTSKK
KQGRPSINQVFGEGVDSVKKSLEGIFDDTVPDGKREKEVALSSVHQHNPDCDIWVHEYFT
PSWFCLPNNQPALTVIRPGDSSHDVLEMICKTHQLDHAAHYLRLKFLIDNQIQFYVPKPE
EEIYELLYKEIEICQKITQHIQMEKSDASSDIYGVSLSSVEEEGICRLYVNSVKETGLAF
KQGLKAGDEVVEINQRAAEELDLALLKDALVQPSLCLTVRTHPELEEGQRLRQLPPRRPE
NPSEPGDGTLAFAASSQGHSLCSDPDSSAEAAPEEAEAQDLESSDEADKMSKDCAGPQLS
TMRQLTDADKLRKVICELLETERTYVKDLNCLMERYLKPLQKETFLTPDELDVLFGNLTE
MVAFQVEFLKTLEDGVRLVPDLEKLEKVEQFKKVLFSLGGSFLYYADRFKLYSAFCASHT
KVPKVLVKAKTDTAFKAFLDAQNPRRQHSSTLESYLIKPIQRILKYPLLLKELFALTDVD
SEEHYHLDVAIKTMNKVASHINEMQKIHEEYGAVFDQLIAEQTGEKKEVADLSMGDLLLH
NTVIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLGGSHRASIYEDWDPFR
FRHMIPLEALQVRALASADAETNSVCEIVHVKSESEGRPERTFHLCCSSPEHRKDFLKAV
HSILRDKHRRQLLKTESLPSSQQYVPFGGKRLCALKGARPAMNRAVSAPSKSLGRRRRRL
ARNRFTIDSEAVHSSSPEKEPAQPAQGGDTDRWVEEQFDLAQYEEQEDIKETDILSDDDD
FCEAARGAQRELRERLQATSLAGGRRPERPCPPGERPCPPRDAHAARMAQLRKQAALPGI
NGAAEGHGEEVIWVRREDFVPGRKLNTEL
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgctgctgatgatgagcgaccgtgacgccatggggaacgcggagagccagagc
gtggagcacgccttctacggggacaagcagccggggctgggccgcaagcacacatcgcgc
tcgctgcgcctctccagcaaggcctcgcgccgcatgcgccacgcgtcctcgggaaagatc
atccaccgcaactcggaggtgagcacacgctccagcagcacgcccagcatcccgcagtcg
ctggccgagaacggcctggagcccttcgccgccgaggccaacctggaggacttcggcagc
cccatgtgggtggagcgcgtggacatgggcctgcgccccgtgtcctaccacacggactcg
tcggtgacgcccagcgtggacagcagcacggtgctgacggctgcctccgtgcacagcatg
cccgactcggaggagagccggctctacggggacgagccgcccttcctggccgagggcgac
gggcgggcgctgcgctacgcggccaacggcaccgccttcatggacgcggccagcttcaag
aagaagcgctccaagtcggccgacatctggcgcgaggacagcctggagttctcgctgtcc
gacctcagccaggagcacttgaccagcaacgaggagatcctgggcctggccgaggagaag
gacgccgaggcagcgcagggcccggacgccggcggcagcccccagcccctggttgcctgc
cagcgggccaactccatgagtgacttgtattcccccaaaacccctggtgctgccatcaac
ggtggcccccggaacgcctttggaggttactgccggaacctggtgtccgacatcccggag
ctcgggagccataagatggcatcggttaccgccgaggacgcgccctcctcctacagtaac
tacaacacgctcccctgcaggaagtcccactgcctttccgaaggggccaccaacccccag
atgagccatagcagcagcatgcaaggcagaagggcgaaaaccacccaggacgtcaacgcg
ggcgagggcagcgagttcaccgacagcggcatcgagggcgcagccaccgacacggacctg
ctgtcgcggcgctccaacgccaccacggccagctactcgccgccggccagccgcgccttc
atcggcagcgacagcggcagcagctcggcgggcgatgggctgcgccagggcgtctacgag
aacttccgccgcgagctggagatgagcaccgcaaacagcgagcacctggaggaggcagga
tctgccctcagcgacgagcagagcagcggcaccctcagctcccccgggcagtccgacatc
ctgctgacggccgcgcagggcaccgtgcgcaaggccggcgccctggccgtcaaaaacttc
ctggtgcacaagaagaacaagaaggtggaatcggccacacgcaggaagtggaagcactac
tgggtgtccctgaaagggtgcacgttgttcttctacgagactgatggccgctctggcatt
gaccacaacagcattcccaaacacgctgtctgggtggagaacagcatcgtgcaagccgtg
cctgagcaccccaagaaggactttgtcttctgcctcagcaactccctcggggatgccttc
ctcttccagacgtgcagccagacggagctggagaactggatcacagccatccactcggcc
tgtgccaccgccgtggcgcggcagcaccacaaggaggacacggtcaagctgctcaaaaca
gagatcaaaaagctggagcagaagatcgacatggatgagaagatgaagaagatgggtgaa
atgcagctgtcctctgtaacagactccaagaagaagaagaccatcctggatcagatcttc
gtgtgggagcagaacctggagcagttccagatggatctgttccggtaccgctgttacctg
gcgagcctgcagggtggggagctgcccaaccccaagcggctgctggcctttgccagccgc
cccaccaaggtggccatgggccgcctgggcatcttctccgtgtcgtccttccacgcgctg
gtggcggctcgcacgggggagtcgggagtgaggagaaggacacaggctatgtccaggtct
gccagcaagcggaggagcaggttttcttctctctgggggctggacactacctcgaagaaa
aagcaagggagaccgagcatcaaccaggtgtttggagaaggagtcgattcagtgaagaaa
tctctcgaagggatctttgatgacacagtcccggatggcaagagggagaaggaggtggcc
ctgagcagtgtccaccagcacaaccccgactgtgatatttgggtccacgagtacttcacg
ccctcgtggttctgcctgcccaacaaccagcctgccctgacagtcatccggcctggggac
tcctcacacgacgtgctggaaatgatctgcaagacacaccagctggaccacgctgctcac
tacctgcgcctgaaattcctcattgacaaccagatccagttctatgtaccaaagccagag
gaggagatctatgaactgctgtacaaggaaatagaaatctgtcagaaaattacccagcac
attcagatggagaagtctgatgcatcctctgatatttatggtgtctctctctcctccgtg
gaagaggaagggatttgccgactgtatgtgaacagcgtcaaggagacaggcctggctttc
aagcaaggcctgaaagctggcgatgaagtcgtggagatcaaccagagagctgccgaggag
ctggacttggcgctgctgaaggacgccctggtgcagccctcgctgtgcctcaccgtgcgc
acccaccccgagctggaggaggggcagcggctgcgccagctgcccccacggcgcccggag
aacccctcggagcccggggacggcaccctggccttcgctgcgagcagccaagggcactcc
ctctgcagtgaccccgacagctccgccgaggcggccccggaggaggcggaagcgcaggac
ctggagtcatcggacgaggccgacaagatgagcaaggactgtgcagggccccagctgagc
accatgaggcagctcacggacgcagacaagctgaggaaggtcatctgtgagctcctggag
actgagcgcacctatgtcaaggacttaaattgcctgatggagagatacctgaagcctcta
cagaaagaaaccttcctcacaccagatgagctggatgttctctttgggaatctgactgaa
atggtagcattccaggtagagttcttgaaaactctggaagatggagtaaggctggttcca
gacctggaaaagcttgaaaaagttgagcaatttaagaaagtgttgttctccctgggtgga
tccttcctgtactacgctgaccggttcaagctgtacagtgccttctgtgccagccacacg
aaagtccccaaagtcctggtgaaagccaagacagacactgctttcaaggcgttcctggat
gcccagaacccgcgccggcagcactcctccaccctggagtcttacctcatcaaacccatc
cagaggatactcaaataccccctcctgctcaaggagctctttgctctcactgatgtggac
agtgaagaacattatcaccttgatgtggccatcaaaacaatgaacaaagttgccagccac
attaatgaaatgcagaaaatccatgaagagtatggggcagtgtttgaccaactcatagca
gaacaaacaggggagaaaaaagaggttgccgacctttccatgggggacttgctcttgcat
aacacagtgatatggctgaaccctcctgcttccctgggcaagtggaagaaggaacctgag
ctggcagcatttgtgttcaaaactgccgtggtccttgtgtacaaggatggttccaaacag
aagaagaaactcggaggatcacatagagcctccatttatgaagactgggatccgttccgg
tttcgccacatgatccctctggaagcgctgcaggtccgggccctggccagcgcagatgca
gagaccaattctgtgtgtgagattgtccatgtcaaatctgagtctgagggcaggccagaa
aggacatttcacctctgctgtagctcaccagaacacaggaaggactttctgaaggcagtg
cactccatcctgcgggacaaacacagaagacagctccttaaaactgaaagcttgccctca
tcccagcaatatgttccttttggtggaaaaagattgtgtgctctaaaaggtgcaaggcca
gccatgaacagggcagtgtcagccccaagcaagtctctggggaggaggaggcggcggctg
gcccgaaacaggtttaccattgactcagaggccgtccacagcagcagccccgagaaagag
cccgcgcagcccgcgcagggaggggacactgaccgctgggtcgaggagcagttcgacctg
gcgcagtacgaggagcaggaggacatcaaggagaccgacatcctgagcgacgacgacgac
ttctgcgaggcggcgcgcggggcgcagcgggagctgcgggagcggctgcaggccacgtcc
ctggcgggcggccggcggcccgagcggccctgcccgcccggagagcggccctgcccgccc
agggacgcgcacgccgccaggatggcccagctgaggaagcaggcggccctgcccggcatc
aacggcgccgccgagggccacggcgaggaggtcatctgggtgcggcgggaggactttgtg
cccggcaggaagctcaacaccgagctctga
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