Corvus cornix (hooded crow): 104684279
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Entry
104684279 CDS
T03546
Symbol
MTR
Name
(RefSeq) methionine synthase isoform X5
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw00270
Cysteine and methionine metabolism
ccw00450
Selenocompound metabolism
ccw00670
One carbon pool by folate
ccw01100
Metabolic pathways
ccw01230
Biosynthesis of amino acids
ccw04980
Cobalamin transport and metabolism
ccw04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
104684279 (MTR)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
104684279 (MTR)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
104684279 (MTR)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
104684279 (MTR)
04980 Cobalamin transport and metabolism
104684279 (MTR)
Enzymes [BR:
ccw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
104684279 (MTR)
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GFIT
Motif
Pfam:
Met_synt_B12
Pterin_bind
B12-binding_2
B12-binding
CdhD
IPT
Motif
Other DBs
NCBI-GeneID:
104684279
NCBI-ProteinID:
XP_010389804
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Position
3:45070228..45121103
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AA seq
885 aa
AA seq
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MANSLQSVMLPARQEALSVAKLQVEMGAQILDINMDDGMLDGPTAMSRFCNFISSEPDIA
KVPLCIDSSNFSVIEAGLKCCQGKCIVNSISLKEGEEDFLEKARKIKLYGAAVVVMAFDE
VGQATETETKIAICSRAYHLLVEKVHFNPNDIIFDPNILTIGTGMEEHNLYAINFINATK
TIKETLPGARISGGLSNLSFSFRGMDAIREAMHGVFLYHAIKYGMDMGIVNAGNLPVYDD
IHKELLQLCENLIWNKDPDATEKLLHYAQNHAQGGKKVVQTDEWRKGSVEERLEYALIKG
IEKYVTADTEEARLNQEKYPRPLNVIEGPLMNGMKIVGDLFGAGKMFLPQVIKSARVMKK
AVGHLIPYMEKEREERRAKQGSTEEEDPYQGTIVLATVKGDVHDIGKNIVGVVLGCNNFR
VIDLGVMTPCDKILRAAVENRADIIGLSGLITPSLDEMIFVAKEMERLAIKIPLLIGGAT
TSKTHTAVKIAPRYSAPVVHVLDASKSVVVCSQLLDDSIKDDFFEEILEEYEEIRQEHYE
SLKERRYLSLQQARRKGFHNNWLSGHIPVKPKFIGTKVFEDYDLKRLVEYIDWKPFFDVW
QLRGKYPNRSFPKIFSDKTVGEEAKRVYNDAQDLLKTLINEKKLQARGVVGFWPARSVQD
DIHLYAVEEAVGSSEPIAKFYGLRQQAEKDSACTDPYYCLSDFIAPLDSGIHDYLGLFAV
ACFGVDDLCNEFRKQDDEYNIIMVKALGDRLAEAFAEELHERVRREFWAYSSSEQLDLSG
LRKIKYEGIRPAPGYPSQPDHTEKLTMWKLANIEETTGIGLTESLAMIPASAVSGLYFSS
PNSKYFAVGKICKDQVEDYALRKNLSVAEVEKWLEPILGYDSEQL
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggccaactctctacagtcggtgatgctaccagcacgtcaggaagccctgagtgtcgcc
aaattgcaagttgagatgggggcccagattcttgacataaatatggatgatgggatgttg
gatggtcccactgcaatgagcagattttgcaacttcatttcttcggaacctgatattgca
aaggtgccattatgcatcgactcctcaaatttttcagtgatagaagcaggtttgaaatgt
tgccaagggaaatgcattgtaaacagcatcagtctaaaggaaggtgaggaagactttttg
gagaaggcaaggaaaattaaattatatggagcagctgtggttgttatggcttttgatgaa
gtgggacaggcaacagaaacagaaaccaagattgcaatttgctccagagcttatcatctc
cttgtggaaaaagtgcacttcaatccaaatgatataatatttgaccctaatattttaacc
ataggaactggaatggaagaacataacctttatgccataaattttatcaatgctactaaa
accataaaagaaacactgccaggagccaggataagtggaggtctttccaatctgtctttc
tcctttcgaggaatggatgccattcgagaggcaatgcatggagtgttcctttaccacgcg
attaagtatggcatggacatgggaattgtgaatgctgggaatctgcctgtgtatgatgat
atccacaaggaattgctacagctctgtgagaatctaatctggaacaaagatcctgatgcg
acagagaaacttttacattatgctcagaatcatgcccaaggaggaaaaaaagttgtacag
actgatgagtggcgtaaaggctctgtggaggaaaggctggaatatgctctcataaagggc
attgagaagtatgtcactgcagatacagaagaagcaagattaaatcaggaaaaatatcct
agacctctaaatgtaattgaagggcctttgatgaatggcatgaaaattgttggtgatctt
tttggtgctggaaagatgtttctgcctcaggtgataaagtctgctcgagttatgaagaag
gcagttggccaccttattccctatatggaaaaagaaagagaggaaaggagagccaagcaa
ggcagcacagaagaagaggatccttaccagggtacaatagtactggcaactgtgaaggga
gatgtacatgatatcggcaagaacattgtgggagttgttctgggctgcaacaatttcaga
gttattgatttaggagtcatgactccatgtgataagatattaagagctgctgttgagaac
agagcagatataattggcctgtctggtctcatcaccccatctttggatgagatgattttt
gtcgccaaggaaatggagagattggcaataaagattcctttgctcattggaggagcaact
acttctaaaacacacacagctgttaaaattgccccacgatatagtgcacctgtagttcat
gtcctggacgcatcgaagagtgttgtggtttgctcccagctcttagacgatagtataaag
gatgatttctttgaagaaatattagaggaatatgaagaaattagacaagaacactatgag
tctctcaaggaaagaagatacttgtctcttcagcaagctagaagaaaaggtttccataat
aactggttatcaggccatataccagttaaaccaaaattcatcggcacaaaagtctttgaa
gattatgacctgaagcggctggtagagtacattgactggaagcccttctttgatgtctgg
caacttaggggaaagtatcccaaccggagtttccctaagatctttagtgataaaactgta
ggtgaagaagctaagagggtttataatgatgctcaagatctactgaaaacattgattaat
gaaaagaaattacaagccagaggcgtggttgggttctggccagctcgaagtgttcaagat
gatatccacttgtatgctgtagaagaggcagtgggatcttcagaaccaatagcaaaattt
tatggattgaggcaacaggctgaaaaggactctgcctgcacagatccatattactgcctc
tctgacttcatagcaccactggattctggcattcatgactacttaggcctgtttgctgtg
gcctgctttggtgtagatgatttatgcaatgaatttaggaaacaggatgatgaatacaac
atcataatggtgaaggctctcggtgatcggttagcagaggcatttgctgaggagctccat
gaaagggttcgaagggaattctgggcttacagtagtagtgagcagctggatctctctggc
ctacgcaaaattaaatatgagggaattcgccctgcccctggatatcccagccagcctgac
catacagaaaaactcaccatgtggaaacttgcaaacattgaggagacaacaggaattggt
ctaacagaatcactagcaatgattcctgcttctgcagtttctggcctctacttttccagt
cccaattccaaatattttgctgttggcaagatatgtaaagatcaggttgaagattatgca
ctgagaaaaaatttgtctgtggcagaggtggagaagtggctagaacccattttgggatat
gactctgaacaactgtga
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