Corvus cornix (hooded crow): 104686257
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Entry
104686257 CDS
T03546
Name
(RefSeq) cystathionine beta-synthase-like protein isoform X1
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw00260
Glycine, serine and threonine metabolism
ccw00270
Cysteine and methionine metabolism
ccw00670
One carbon pool by folate
ccw01100
Metabolic pathways
ccw01230
Biosynthesis of amino acids
Module
ccw_M00035
Methionine degradation
ccw_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
104686257
00270 Cysteine and methionine metabolism
104686257
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
104686257
Enzymes [BR:
ccw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
104686257
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Motif
Pfam:
PALP
CBS
DUF1414
Motif
Other DBs
NCBI-GeneID:
104686257
NCBI-ProteinID:
XP_039408872
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Position
1:113233565..113259179
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AA seq
577 aa
AA seq
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MEKFVSERPVPLSKNEILTLPSQKKPDTNSCPHAPAKYFVSGGVDSENCKANEKERQWIR
PDTPSKCTWKLGKPLSASPHHHATLPEPPKILPNILNKVGNTPLVRINKIGKHFGLKCEL
LAKCEYFNAGGSVKDRISLRMVEDAEKAGILKPGDTIIEPTSGNTGIGLALAAAVKGYRC
IIVMPEKMSMEKVDVLRALGAEIVRTPTTARFDSPESHVGVAWRLKNEIPNAHILDQYRN
ASNPLTHYDTTAEEILQQCDGKVDMVVATAGTGGTITGISRKLKEKCPGCKIIGVDPEGS
ILAEPEELNKTDKTMYEVEGIGYDFVPTVLDRSTVDQWYKSNDEESFALARMLIREEGLL
CGGSSGSAMSVAVKAAKELKEGQRCVVILPDSIRNYMSKFLSDKWMIQKGFMKEEDLGNK
PWWWNISIQELSLSAPLTVLPTVTCAKTVEILREKGFDQVPVVDESGVILGMVTLGNMLS
SLLVGKVKPSDEVRKVIYKQFQQTDNPASWGNVINLKDNLGKLSHILEIDHFALVVHEQI
QYHTDGSSSKRQMVFGIVTAIDLLNFVTARERERKSN
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtttgtctcagaaaggcctgttcctctgtctaagaatgaaatccttactctt
ccttcccagaagaagccagatacgaactcatgccctcatgcacctgccaaatattttgtc
tctggtggggtggactccgagaactgcaaggccaatgagaaggaaaggcagtggatccgc
cctgatacacccagcaaatgcacctggaagcttgggaaacccctctctgcctccccccat
caccatgccaccctgccagagcctccaaagatcctgccaaacatcctgaataaagttggc
aacacacctttggtgcggatcaacaagattgggaagcactttgggctcaagtgtgaactc
ttggccaagtgtgagtacttcaacgccgggggcagcgtgaaggaccgcatcagcctcagg
atggtggaggatgctgagaaggctgggatcctgaagcctggggacaccatcatagagcca
acctctgggaacacagggatcgggctggccttggcggcggcagtgaagggttaccgctgc
atcatcgtcatgccagagaagatgagcatggagaaggtggatgtcctgagagctctgggt
gctgagattgtgaggaccccaactactgccagatttgattctcctgaatctcacgtagga
gtggcctggaggctgaagaacgaaatccccaatgcacacatcctagaccagtaccgcaat
gccagcaaccccctgacgcactatgacaccacagctgaggagatcctgcagcagtgtgat
ggaaaggtggacatggtggtggccacggctggcacaggaggtaccatcactggcatctcc
aggaagctgaaggagaagtgtccaggatgcaaaattataggtgtggatcctgaaggctcc
atcctcgctgaaccagaagaactgaacaagactgacaagacaatgtatgaagtggaagga
attggatatgattttgtccccacagtgttggatagatctactgtggaccagtggtacaag
agcaatgatgaggagtcgtttgctttagcacggatgctgatccgcgaggagggactgctg
tgtggtggcagctcgggcagtgccatgtctgtagctgtgaaggcagccaaggagctgaag
gagggtcagcgctgcgttgtcatcttacctgactccatcaggaactacatgtccaagttc
ttgagtgacaaatggatgattcagaaagggtttatgaaagaagaagaccttggcaacaaa
ccttggtggtggaatatcagtattcaggagctgagcctctctgcccccctgaccgtgctt
ccaactgttacctgtgcaaagactgtggaaatcctccgggagaagggattcgaccaggta
ccagttgttgatgaatctggggtgattctgggcatggttaccctgggtaacatgctttcc
tcactgcttgttggaaaagttaagccttctgatgaagtcagaaaagtaatctacaagcaa
ttccaacagacagacaatccagcatcgtggggaaatgtgatcaacctgaaagacaacttg
gggaaactctctcacatcctggaaatagaccactttgctctggtggttcatgaacagatt
caatatcacacggatggctcctccagcaagcggcagatggtgtttggcatcgtgacagcc
atcgacctcctgaactttgtaaccgcacgggagcgggagaggaaatccaactaa
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