Corvus cornix (hooded crow): 104686673
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Entry
104686673 CDS
T03546
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04620
Toll-like receptor signaling pathway
ccw04621
NOD-like receptor signaling pathway
ccw04622
RIG-I-like receptor signaling pathway
ccw05164
Influenza A
ccw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
104686673 (TRAF3)
04621 NOD-like receptor signaling pathway
104686673 (TRAF3)
04622 RIG-I-like receptor signaling pathway
104686673 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104686673 (TRAF3)
05168 Herpes simplex virus 1 infection
104686673 (TRAF3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF3_RING
zf-TRAF
zf-C3HC4
Cast
MPS2
ATG16
zf-C3HC4_2
FliJ
Sina_ZnF
Spc29
Tropomyosin
zf-RING_UBOX
KxDL
GAS
zf-RING_6
DUF1664
Crescentin
SPATA24
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
104686673
NCBI-ProteinID:
XP_019138721
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All DBs
Position
5:complement(10239107..10309124)
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AA seq
567 aa
AA seq
DB search
MDTSKKSEPPLSVEMVQQRANPDRSPSASIYVPEQGGYKEKFVNAVEDKYKCEKCHLILC
NPKQTECGHRFCETCMNALLSSSSPKCTACQESIVKDKVFKDNCCRRELLALQIYCRNEN
KGCKEQLSLGQLLMHLKTDCQFEELPCPRADCKEKILRKDLPDHVEKTCKYREATCKYCK
SQVPMIMLQKHEDTDCPCVMVSCPHKCSVKTLMRSELNAHLSECINAPSTCSFKRYGCTF
QGTNQQIKAHEASSAVQHVNLLKEWSNALENKVALLQNESLEKNKSIQTLHNQICSFEIE
IERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESVDKTAGQGARNTSLLETQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggacaccagtaagaagtcagaaccccctttatctgtagaaatggtacaacaaagggcc
aatcctgaccgcagtccatcagcatcgatctatgttccagagcaaggaggctacaaagag
aaatttgtgaatgctgtggaagataagtacaaatgtgaaaaatgtcacctcatcttatgc
aatcctaaacagactgaatgtggacacagattctgtgaaacctgcatgaatgccttgctg
agttcttctagtccaaaatgtacagcgtgtcaagaaagcatagtaaaagataaggtattt
aaagataattgttgcaggagagaactacttgcccttcaaatatactgcagaaatgaaaac
aagggctgtaaggaacagctgtctttgggtcaattactgatgcatttgaaaactgattgt
cagtttgaagaactcccatgtcctcgtgctgattgcaaagaaaaaatactgagaaaggat
ttgccagaccatgtagagaagacctgtaaataccgggaggcaacctgtaaatactgtaaa
agccaagtcccaatgattatgttgcagaaacatgaagatacagactgcccatgtgtcatg
gtttcatgtcctcataaatgtagtgttaaaacactcatgaggagcgagttgaatgcacat
ttgtcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcactttt
cagggaacaaaccaacaaattaaagcacatgaagccagctcagcagtgcagcatgttaac
ttattgaaagagtggagcaatgctctagaaaataaggtggccttgctccagaatgaaagt
ttggaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaa
attgaaagacagaaggaaatgctgcggaataatgaatctaaaatacttcatttacagcga
gtgatagacagtcaagcagagaaactcaaagaactggacaaagaaatccgtcccttccga
cagaactgggaggaggctgacagcatgaagagcagcgtggaatccctccagaacagagtg
actgagctggaaagtgttgataaaactgcaggacaaggagctcggaatacaagcctgctg
gagacccagctgagcaggcacgatcagatgctgagcgttcacgacattcggctggctgac
atggacctccgcttccaggttctagaaactgcgagttacaacggagtgttaatttggaaa
atccgagattataaacgtcggaagcaagaagcagtcatggggaagactctgtccttgtac
agccaacccttttatactggatactttggctacaagatgtgtgctagagtttacctgaac
ggagatggcatgggaaaggggacgcacttgtctctgttttttgtcataatgcgtggagaa
tacgatgctttgcttccttggcccttcaaacagaaagtgactctcatgctcatggatcag
ggaccgtctcgacgccacttgggagatgctttcaagccagatccaaacagcagcagtttc
aagaagccaactggagaaatgaacattgcatctggctgcccagtctttgtggctcaaact
gttctagagaatggaacgtatattaaagatgatactatttttattaaagtcatagtggat
acatcggatctaccagacccctga
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