Corvus cornix (hooded crow): 104686893
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Entry
104686893 CDS
T03546
Symbol
CACNA2D1
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04010
MAPK signaling pathway
ccw04260
Cardiac muscle contraction
ccw04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104686893 (CACNA2D1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
104686893 (CACNA2D1)
04261 Adrenergic signaling in cardiomyocytes
104686893 (CACNA2D1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccw04040
]
104686893 (CACNA2D1)
Ion channels [BR:
ccw04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104686893 (CACNA2D1)
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
MCP-like_PDC_1
dCache_1
vWA-TerF-like
DUF3983
Motif
Other DBs
NCBI-GeneID:
104686893
NCBI-ProteinID:
XP_039426106
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Position
1A:9113390..9478877
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AA seq
1115 aa
AA seq
DB search
MAAGWLLVFSLTLFQSLVMNHSSEGPFPSATTIKAWVDKMQEDLVTLARTASGVDWLAQI
YTKNTALYTVEANNPRQLVEIAARDIEKLLSNRSKALVRLAKEAEKYQASHQWRDEFGNN
DIIYYNAKDDQNDPEKNETESGSQRIRPVFEDDPVFRRQTSYQHAAVHIPTDIYEGSTIV
LNELNWTAALDDVFKRNREEDPTLLWQVFGSATGLARYYPASPWVDKSRTPNKIDLYDVR
RRPWYIQGAASPKDMLILVDASGSVSGLTLKLIRTSVIEMLETLSDDDFVNVVSFNNNAQ
NVSCFNHLVQANVRNKKKLKEAVYKISAKGITDYKKGFSYAFEQLLNHSVSRANCNKIIM
LFTDGGEERAQEIFHKYNEDKKVRVFTFSVGQHNYDKGPIQWMACENKGYYYEIPSIGAI
RINTQEYLDVLGRPMVLAGEQAKQVQWTNVYLDALELGLVITGTLPVFNLTREQNGKINQ
LILGVMGVDVSLEDIKKLTPRFTLCPNGYYFAIDPNGYVLLHPNLQPKQIGVGIPKVKLR
KRRPNVQEPVTLDFLDAELENDIKVEIRKKMIDGESGEKTFETLVKSQDERYIDKGNRTY
TWTAVNGTDYSLALVLPSYSFYYIKAKIDEPITQARLTSKKVSESLKLDHFDEAGYTFLA
PRDYCNDVKKSENNTEFLLNFNEFIDRNTPSSSSCNTDMVIRVLLDAGFTNELAQNYWSK
LSLDGVVAQFVVTDGGITRVFPKRAGEDWLENAETYEVSFYKRSLDNDNYIFTAPYYNKS
GANSYESGIMVSKAVEIEIDGKLLKPAVVGIKIDATSWMENFTKTTIKSLCNSEICGCER
NSMHVDCVILDDGGFLLMSNRDEYTQQIGRFFGEIDPGLMRNLINMSLYAFNKSYDYQSV
CDPEEEPKQGAGLRSAYVPTITDILQLGWWASAAAWSILQQLFLSLTFPRFLEAADMEDD
DFGAALPKTSCITEQTQYFFENNDKSFGGIVDCINCSRLYHAEKISNTNLVFIISDSQLL
CRSCDPKPLMQAEKPDEGPNPCEMVKQPRYRKGPEICFDEAKQDQPICTTSRASAMTSAP
IFIFLQVFMWCGWSVTFSNFLFCSWLKKLADFFTY
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atggctgctggctggctgctggtctttagcctgacacttttccagtccctggtgatgaac
cactcctcggagggacccttcccctcggccaccacgataaaagcatgggtggataagatg
caagaagatctcgtgacgctcgcacgaactgcaagtggagtggactggcttgctcaaatt
tatacaaaaaacacagcattgtatactgtagaagcaaacaaccctcgtcagctagtggaa
attgcagccagagacatcgaaaaacttctaagtaataggtctaaagccttggtgcgcctt
gctaaagaagcagagaagtaccaagcatcacatcagtggagggatgagtttgggaataat
gatataatctattacaatgcaaaagacgatcagaatgatcctgaaaagaatgaaactgaa
tctggcagccagagaatcagaccagtgtttgaagacgatcctgttttccgacggcaaaca
tcttaccaacatgcagcagtccacataccaacagatatttatgaaggctcaacgatagtg
ttaaatgaactcaactggactgcagcgctggatgatgtgttcaagcggaacagagaagag
gaccccactttattatggcaggtctttggtagtgccactgggctcgcaaggtattatcca
gcttccccatgggtagataaaagtcgaactcctaacaaaatagacctgtatgatgtacgc
agaaggccatggtacatccaaggagctgcatctcccaaagacatgcttattttagttgat
gcgagtgggagtgtcagtggattaacattgaagctgatccgcacgtcagtcattgagatg
ttggagaccttgtctgacgatgactttgtgaatgtagtttcatttaataataatgctcag
aatgtcagttgctttaatcatcttgtccaagctaatgtgaggaacaagaagaaattgaaa
gaagctgtctataaaatctctgctaaaggaattacggattacaaaaaaggctttagctac
gcttttgaacagctgctaaatcacagtgtctccagagctaactgcaataagattattatg
ttgtttacggatggtggtgaagaaagagcacaagaaattttccacaaatataacgaagac
aaaaaagtacgtgtgttcacattttctgttggtcaacataattatgacaaaggacccata
cagtggatggcctgtgaaaataaaggttattattatgaaattccatctattggagccata
agaataaacacccaggaatatctggatgtcttgggaagaccaatggttttagctggagag
caagccaaacaagtccaatggacaaatgtctatctggatgctctggagctgggacttgtg
attacaggaactctgcctgtcttcaacctaacaagggaacaaaatgggaaaatcaatcag
ctgattcttggagtaatgggggtagatgtctctttggaggacataaaaaaactgactccc
cgatttacgctttgtccaaatggatactattttgcaattgatcctaatgggtatgtgcta
ctgcatccaaatctccaaccaaagcaaattggtgtgggcataccaaaagttaaattgaga
aaaaggagacccaatgtacaggagcctgttacgctggattttctagatgctgaattggaa
aatgatattaaagttgagattcggaaaaaaatgatagatggagaaagtggagaaaaaaca
tttgaaacactggtcaagtcccaagatgagaggtatattgataaaggaaacagaacgtat
acgtggactgctgtgaatggcactgattacagtttggcattggtgttaccatcatacagc
ttttattatattaaagccaaaatagacgaacctataactcaagccagattgacatccaaa
aaggtttcagaatcactgaagcttgatcattttgatgaagctggctatacgtttttagca
ccaagagactactgtaatgatgtaaagaaatcagagaacaacactgaatttctattaaat
ttcaatgaatttattgacagaaatactccgagcagttcatcgtgtaatactgatatggtc
attagagttttgctggatgcaggatttacaaatgaacttgcccaaaattattggagtaaa
ctgtctcttgatggagttgttgcacaatttgttgttacagatggtggaattactagagtg
ttccccaaaagggcaggagaagattggttggaaaatgctgaaacttatgaagtcagcttc
tataagaggagtttagataatgacaactatattttcacagccccatactacaacaaaagc
ggtgccaatagctatgaatcaggtattatggtaagcaaggctgtggaaatagaaattgat
gggaagcttctgaagccagcagttgttggaataaaaattgatgcaaccagctggatggaa
aatttcacaaaaaccacaatcaagagcctgtgcaacagtgaaatctgtggctgtgaaaga
aatagcatgcatgtggactgtgttatccttgatgatggtggatttcttctgatgtccaat
cgagatgaatatacacaacagattggaagattctttggtgaaattgatcctggcctgatg
cgaaacctgattaacatgtccctgtatgcctttaacaagtcgtatgactatcagtcagtc
tgtgatcccgaagaagaaccaaagcaaggagctggacttcgttctgcttatgtgcctaca
ataacagatattttacaacttggatggtgggcttcagcagcagcctggtctatcttacag
cagctgtttttgagcctgacttttccacggttccttgaagcagctgatatggaagatgat
gatttcggtgctgccctgcctaaaacaagctgtatcactgagcaaactcaatatttcttt
gaaaacaatgataaatcctttggtgggattgtagactgtataaactgctccagactttat
catgcagagaagatttcaaacaccaatctagtgttcattattagtgacagccaactgctg
tgccgttcctgtgacccaaagccactgatgcaagcggagaagccggatgaagggccaaat
ccatgtgaaatggtcaaacaacctagatacagaaaaggtcccgaaatctgttttgatgaa
gccaaacaggatcagcctatatgcacaacgagtcgtgcctctgccatgacgtccgctcct
atcttcatttttctgcaagttttcatgtggtgtggatggtcagttactttctctaatttt
ttgttttgttcttggcttaaaaaattagcagacttttttacttactga
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