Corvus cornix (hooded crow): 104687125
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Entry
104687125 CDS
T03546
Symbol
CD4
Name
(RefSeq) T-cell surface glycoprotein CD4 isoform X1
KO
K06454
T-cell surface glycoprotein CD4
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03250
Viral life cycle - HIV-1
ccw03260
Virion - Human immunodeficiency virus
ccw04060
Cytokine-cytokine receptor interaction
ccw04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104687125 (CD4)
03260 Virion - Human immunodeficiency virus
104687125 (CD4)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
104687125 (CD4)
04514 Cell adhesion molecule (CAM) interaction
104687125 (CD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ccw04090
]
104687125 (CD4)
CD molecules [BR:
ccw04090
]
Proteins
104687125 (CD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tcell_CD4_C
V-set
ig
Ig_2
Ig_3
I-set
V-set_CD47
C2-set
Ig_6
CD4-extracel
Sema4F_C
TM_ErbB1
DUF1218
Motif
Other DBs
NCBI-GeneID:
104687125
NCBI-ProteinID:
XP_010394415
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All DBs
Position
1:28184973..28196930
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AA seq
485 aa
AA seq
DB search
MELCSTAVSCMAAAFLLLHLGLISSMAQQNEVQTGLVGGEVTLKCTGIPLDSKLSRDEVS
WMYYKTLLWRTENNNAWRTSAFPTHRADVKMENKQLRMWDLKLSDAGIYTCKSSSHEVRI
SLHIFKLTVSLDGHFLQNEVPELILMQNSSSPLPNLKITLFNSNNNKVIPELQSKTHQKY
IVNLKKLEATDSGTWLCQVRSDSPLINQNISFVIKVLGFQNPDLERKYATVDSTVILSWH
LNSQKIKWKEGFTGQLNWKQQEGANAHELLDFKVTAQGELHETKKSSNFLFEIPERNAEI
IIEVKLPKVYFNHSGQYQCQLEYQGRHVQSKIELVVMKVSANPDGPLSRGANMTLTCQVS
GPLPPNAYLRWERVNGTTMDVKNSRQREIKLEVNISAAGLWSCHLIEDNDRKISLHYHVE
EAPVWISYVIIGASVAGSLLVFALGCLCIISGISWQRRMQRRKRMAQARQYLLENKTCQC
QHRLN
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtgcagcacagccgtgagctgcatggctgccgccttcctgcttctgcatctg
ggtctgatctccagtatggctcagcaaaatgaagtccagactgggcttgtaggaggggag
gtgaccctgaaatgcacaggcatacctcttgactcaaaattatctcgggatgaagtgagc
tggatgtactataaaactcttctatggcggacggaaaacaataatgcttggagaacatca
gctttccctactcatcgagctgacgtcaagatggaaaataaacagctgaggatgtgggat
ttgaagctctctgacgctggcatctacacctgtaaatccagctctcacgaagtccgcatc
tcactgcatatctttaaattgacagtctctttggatgggcactttctgcaaaatgaggtc
cctgaactgattttaatgcaaaactcatccagtcctctacccaatctcaagatcacattg
tttaacagcaacaacaacaaagtaataccagaattacaaagcaagacccatcaaaaatac
atagtgaatttaaagaaactggaagctacggacagtgggacctggctgtgtcaggtccgt
tcagactctccactgattaatcagaacatctcctttgttataaaggtactaggttttcag
aatccagatttggaaagaaagtatgcaactgttgatagcactgtcatcttgtcatggcat
ctgaactcccagaagataaaatggaaagaaggtttcacaggacagctgaactggaaacaa
caggaaggtgcaaacgctcatgagctgcttgatttcaaagtcacagcacaaggagagctg
catgagactaaaaaaagcagcaactttctgtttgagatacctgaaagaaatgctgaaatc
atcatagaagtgaagctccccaaagtatatttcaaccattctggacagtaccagtgccag
ctggagtaccaaggaaggcatgtgcagagcaagatagagctggtggtgatgaaagtctca
gctaaccctgatgggccactctccagaggggccaatatgaccctgacctgccaggtctct
ggtccactcccacccaatgcctacttgcgctgggaacgtgtgaatgggactaccatggac
gttaagaattcaaggcagcgtgaaataaagttggaggtgaacatcagtgctgcagggctg
tggagctgtcacctcatagaagacaatgacagaaagatcagccttcattaccacgtggag
gaagctcctgtttggattagctatgtgataattggagcaagtgttgcaggcagtttattg
gtgtttgcccttgggtgcctatgcatcatcagtggtataagctggcagaggagaatgcaa
cggagaaaaaggatggcacaagcaagacaatacttgctggaaaacaagacgtgtcagtgt
caacaccggctgaactaa
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