Corvus cornix (hooded crow): 104687226
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Entry
104687226 CDS
T03546
Symbol
ATN1
Name
(RefSeq) LOW QUALITY PROTEIN: atrophin-1
KO
K05626
atrophin-1 (dentatorubral-pallidoluysian atrophy protein)
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
104687226 (ATN1)
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Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
CCDC47
Motif
Other DBs
NCBI-GeneID:
104687226
NCBI-ProteinID:
XP_039416512
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Position
1:28281861..28306834
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AA seq
1215 aa
AA seq
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MFSSNRAKENGGPTPKRMKTRQNKDSMSMRSGRKKETPGPREELRSRGRASPGGVSTSSS
DGKAEKSRQATKKGRLEESCTPKSSKQGRTEEISESEGEDTNAPKKTKTEELPCPPSPSD
VDSLDGHSFNDEMSSDPRDIDQDNRSTSPSVYSPGSVENDSDSSSVLSQGPSHSYHHPPL
FPQSPPVAAPPDSLARPPEPSFGLPGEVHPQGPPAGSYHSQLEGQASRIFQAQAPQTPSS
SSSSSSSAVAAPSAPPSSSSSSSSASSSSSSHTPLYPTANVVQVGAKIASGVGGLPAPGA
REQTLSAKHNPPPTTPISLASVGGGLPPQKTPPANPPAAPPASAPSFPHVSSNLPPPPAL
RPLNNAVAASSSPGMVGQALSGHLPSPHSMGQDKAPALAPSRYPYAPPPLPPSSSSAQYP
QPSPGQPLPSYSASYGHSFPPPSGLSVSSQPPKYTQPSLPSQPVWSQGPPPYSRPLGNAG
SHPAAPFPGQXPHHQQPPQQHHHGHGSSGGVSPAAAAPPQPPGGYPHGLESNSHHPSHPT
YGLRLYPPHSQAAYSQAPSATAAVAPSSSSSSSSSSSSSSSSSAASSQGSYPSMCTHPPG
QSPATYTXPPPPPPSPAHGAGPPVTSAATTLSTVIATMASPSAAPYKTVSPPVPPSAVAP
YGKRAASPVPTFQPPAPYKPGSPPTSSAAPFRAATPPGYRVASSPVAGGYKAPSPAPSGP
PPLPGSMAAPAPPPPPLPLSAAQIKQEPSEEYEPPESPVPPARSPSPPPKVVDVPSHASQ
SARFNKHLDRGFNSCSRTDLYFVPLDGSKLAKKRADLVEKVRREAEQKAREEKERERERE
REKEREREKERELERSVKMAQEGRPVECSSLGPVPHRPSFEQGSAVATVPPYLGPDTPAL
RTLSEYARPHVMSPSNRNHPFYVPLGAVDPGLLGYNVPAIYSSDPATRERELREREARER
DLRDRDLRERLKPGFEVKPAELEQLHAVPAAAMDPFPRHGGLSLQTAPGLHPAFPFHPGL
GHLERERLALAAGPTLRPDMSYAERLAAERQHAERVAALSNDPLARLQMLNVTPHHHQHS
HIHSHLHLHQQDAIHAASASVHPLIDPLASGSHLTRIPYPAGTIPNPLLPHPLHENEVLR
HQLFAAPYRDLPGSLSAPMSAAHQLQAMHAQSAELQRLALEQQQWLHAHHPLHGVPLPTQ
EDYYSHLKKESDKPL
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgttttcatcaaaccgggccaaggagaatgggggtcccacacccaaaagaatgaagaca
cgacagaacaaggactcaatgtcaatgcggagtggacggaagaaagagactccggggccc
cgagaggagctcaggtcacggggtcgagcttcccctggcggcgtcagcacctccagcagt
gatggcaaggctgagaaatcccgacaagcgacaaagaaaggccgtttggaggaatcctgc
acccccaagagcagcaagcagggccgaacagaagagatctcagagagtgaaggggaggac
accaatgctcccaaaaaaaccaaaactgaggagttgccctgtcctccatccccgtctgat
gttgacagccttgatggccacagcttcaatgatgagatgagcagcgacccacgggacatt
gaccaggataacaggagcacctcgcccagtgtctacagccctgggagcgtggagaatgac
tccgactcctcttctgtgctgtcccaggggccgtctcactcctaccaccaccccccgctc
ttcccccagagcccgccagtagctgcccctcccgacagcctggcccgcccaccagaaccc
agctttgggctcccgggcgaggtgcacccccaaggaccccccgcaggaagttaccattcc
cagctggagggccaggcctcccgcattttccaggctcaagccccacagacaccttcctcc
tcctcttcctcttcctcctctgctgttgctgccccttctgctcccccttcctcctcctcg
tcctcttcctccgcttcgtcctcctcttcctcccacactcccctttatcctacggccaat
gtggtccaggttggggccaaaattgccagtggagtgggagggctcccagcaccaggggct
cgtgagcagaccctcagcgctaagcacaatccaccacccaccacgccaatctcactggcg
tcggtaggaggagggcttcccccccaaaagacgcccccagccaaccctccagctgccccc
ccggcctcggccccttccttcccccacgtctcctccaacctgcctcccccaccggccctg
cgccccctcaacaacgcagtggccgcctccagttccccagggatggtggggcaggccctg
agcggccacttgccctcgccccacagcatggggcaggacaaggcaccagccctggccccc
tcccgctacccctacgccccaccaccgctgccgccctccagctcctctgcccagtacccc
cagccctccccgggccagcccctgcccagctacagtgcttcctatgggcactcctttccc
ccgcccagcggcctctctgtctccagccagccccccaagtacacccagccctccctgccc
tctcagcccgtctggagccaggggccacccccttacagccggcccctgggcaatgccggc
tcccaccccgctgcccctttccctggccagntcccccatcaccagcagccaccccagcaa
caccaccacggccatgggagcagtgggggtgtctccccagcagccgcagctcctccccag
ccccccgggggctacccccacggcctggagtccaacagccatcacccttcccatcccacc
tacgggctgcgcctctaccctccgcacagccaggctgcctacagccaggctccctccgcc
actgcggccgtcgccccctcttcctcctcctcctcgtcctcctcctcttcctcttcctca
tcctcctctgctgcctcttcccagggaagctaccccagcatgtgcacgcacccaccgggg
cagagtcctgccacctacaccnttcccccgccgccacccccctcccctgcccatggagcc
ggccctccagtcacctccgctgccaccaccctctccaccgtcattgccaccatggcctcc
ccctctgcagccccctacaagacagtctcacccccggtacccccgtcagctgtggcccca
tatgggaagcgggcggcctcccctgtccccaccttccagcccccggccccttacaagccg
ggctcgccccccacttcctcagctgcccctttccgtgcagccacccctcctggctaccgg
gtggcctcttcccctgtggcagggggctacaaagccccctcacccgccccctctggccca
cctcccttgccagggagcatggctgcccctgcccccccaccgcccccactccccctcagc
gctgctcagatcaagcaggagccgtcggaggagtacgagcccccagagagccctgtgcca
cctgctcgcagcccctcacctccccctaaggtggtggatgtgccgagccatgccagccag
tcagccagattcaacaaacacttggaccgtggcttcaactcctgctcccgcacagacctg
tattttgtgccccttgatggctccaagctggccaagaaaagggcagacttggtggagaaa
gtgcgtcgagaggctgagcagaaggcccgtgaagagaaggagcgtgaacgggaacgggag
cgggagaaggagcgggagcgggagaaggaacgggagctggagaggagtgtgaagatggcc
caggagggccgtccggtcgagtgctcgtccctcgggccggttccccaccgcccctccttc
gagcagggcagtgctgtagcgactgttcccccatacctgggccccgacaccccggctctg
cgcacccttagcgaatacgcccggccccacgtcatgtcccccagcaaccgcaaccaccct
ttctacgtgcccctgggcgccgtcgacccgggcctgctggggtacaatgtgccagccatc
tacagcagcgatccggccacgcgggagcgggagctgcgggagcgggaggcccgcgagcga
gacctgagggaccgggacctgcgtgaacgtctcaagcctggctttgaagtcaaaccagcc
gagttggagcagctccatgccgtgccagctgctgccatggatccgttcccacgccatggc
gggctgagtctgcagacggcccccggccttcatcctgcttttcccttccacccagggctg
ggccacttggagcgggagaggctggcgctggcagctggcccgacccttcgtcccgacatg
tcctacgccgagcgcttggcggctgaacgccagcacgccgagcgggtggctgctctcagc
aatgaccctctggcccggctgcagatgctcaatgtgacgcctcatcatcatcagcattcc
cacatccactcccacctccatctccaccagcaggatgccatacacgcagcctcagcctcc
gttcaccctctaatcgaccccctcgcctcgggatcacacctcacccggataccataccca
gctggaaccatccccaaccctctcctgcctcaccctctacatgagaatgaagtactgcgc
caccagctctttgctgcaccgtacagggacctgccgggctccctctcagcgcccatgtcg
gcggcacaccagctgcaggccatgcacgcgcagtcggctgagctgcagcgcctggctctg
gagcagcagcagtggctccacgcccaccaccctctgcacggcgtgccgctccccacgcag
gaggactactacagccacctgaagaaggaaagtgacaaacccctttaa
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