Corvus cornix (hooded crow): 104687728
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Entry
104687728 CDS
T03546
Symbol
MMP9
Name
(RefSeq) matrix metalloproteinase-9
KO
K01403
matrix metalloproteinase-9 (gelatinase B) [EC:
3.4.24.35
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccw01002
]
104687728 (MMP9)
Enzymes [BR:
ccw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.35 gelatinase B
104687728 (MMP9)
Peptidases and inhibitors [BR:
ccw01002
]
Metallo peptidases
Family M10
104687728 (MMP9)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
Reprolysin_4
DUF4953
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
104687728
NCBI-ProteinID:
XP_039419653
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All DBs
Position
20:complement(6766770..6771368)
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AA seq
697 aa
AA seq
DB search
MALLLAPLVVGLLAVSCCAAPLQSKPQAVVTFPGDLISTLPDLQLAERYLQRFGYTTEAE
AKIGGRHVSLGKALLKMQKQLGLEETGELDAATLEAMRAPRCGVPDVGTFLTFDGDLKWD
HMDLTYRVINYSPDLDRAVIDDAFRRAFQVWSDVTPLTFTQIYSGEADIMIMFGSQEHGD
GYPFDGKDGLLAHAFPPGQGIQGDAHFDDDEFWTLGTGLVVKTRHGNANGAECHFPFIFE
GRSYSRCTTEGRKDGLPWCATTPNYDQDKKYGFCPSELLYTNGGNSDGAPCVFPFVFDGT
SYDTCTTDGRSDGYRWCATTSSFDQDKKYGFCPNRDTAVIGGNSQGDPCVFPFTFLGQSY
STCTSEGRQDGKLWCATTSNYDTDKKWGFCPDRGYSIFLVAAHEFGHSLGLDHSSVREAL
MYPMYSYIQDFQLHPDDVQGIQYLYGRGSGPKPTAPAPAPTEEPQPVPTEETQPMPTEAG
STSTTEEEEEEMPEPTAGPIPVDPSRDACMEKNFDAVTEINGELYFFKDGKYWTYSSFWK
SGIQGAFSVADTWPGLPDTIDAVFQDLLTKRVFFFAGRQFWVFSGKSVLGPRGIEKLGIG
KEAGRISGALQRGRGKVLLFSGESYWRLDVKVQRVDKGYPRATDDVFTGVPLDARNVFLY
QGKYHFCRGSFYWRMTPRYQVDRVGYVKYDILQCPQH
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggcactcctcctggccccgcttgtcgtggggctgctggccgtctcctgctgtgcggcc
cctctccagagcaagccgcaggcggttgtcaccttcccgggggacctgatcagcaccctg
ccggatctacagctggcagagcgctacctgcagaggttcggctataccacggaggcagag
gctaagattggtggcaggcacgtgtccctgggcaaggcactgctcaagatgcagaagcag
ctgggcctggaggagacgggggagctggatgctgccacgctggaggccatgcgagccccc
cgctgcggcgtccctgatgtgggaaccttccttacctttgacggggacctcaagtgggac
cacatggacctgacttaccgggtgataaactactcccccgacctggaccgtgccgtgatc
gatgatgccttcagacgggcgttccaagtgtggagcgatgtgacccctctcaccttcacc
cagatatacagtggcgaggcagacatcatgatcatgtttggcagccaagagcatggggac
gggtaccccttcgacggcaaggacggcctcctggcccacgcctttcccccaggccagggc
atccagggcgatgcccactttgacgacgatgagttctggacactgggaaccggcttagtg
gtgaagacccgccacgggaatgccaatggagccgaatgccacttccccttcatctttgag
ggccgctcctactcccggtgcaccacggaggggcgcaaggatgggctgccctggtgtgcc
accacccccaactatgaccaggacaagaaatatggcttctgccccagcgagctcctctac
accaatggtggcaacagcgatggagccccctgcgtcttccccttcgtctttgatggcacc
tcctatgatacctgtaccacagatgggcgctccgatggctaccgctggtgtgccaccacc
tccagcttcgaccaggacaagaaatacggcttctgccccaaccgagacacggcggtgatc
ggcggcaactcccagggggacccgtgcgtctttcccttcaccttcctggggcagtcctac
agcacctgcaccagcgagggccggcaggacggcaagctctggtgtgccaccactagcaac
tatgacactgacaagaagtggggcttctgccctgacagaggttacagcatcttcctggtg
gctgcccatgagtttggacactcactggggctggaccactccagtgtgcgtgaggccctg
atgtaccccatgtacagttacatccaggacttccagctgcaccccgatgatgtccagggc
atccagtacctctacggtcgtggctctggccctaagcccactgcacctgcacctgctccc
actgaggagccccagcccgtgcccacagaggagacccaacccatgcccacagaggctggc
agcacctccaccactgaggaggaggaggaggagatgccagagcccacagctggacccatt
cctgtggacccaagccgggatgcctgcatggagaagaactttgatgctgtcacagagatc
aatggggagctgtacttcttcaaggatgggaaatactggacctactcatccttctggaaa
tcgggcatccagggtgccttctctgttgctgatacctggcctggcctcccagacactatc
gatgctgttttccaggacttgctcaccaagagggtcttcttctttgccggtcggcagttc
tgggtgttttctgggaagagtgtgctgggcccccgggggattgagaagttgggtataggg
aaggaagccggccgcatctcgggggccctgcagcggggccgcggcaaagtgctgctcttc
agcggggagagctactggaggctggatgtgaaggtccagagggtggacaagggctacccc
cgtgccaccgacgatgtcttcaccggcgtcccccttgatgcacgcaacgtgttcctctac
caaggcaagtatcacttctgccggggcagcttctactggaggatgacaccgcgctaccag
gtggaccgagtgggctacgtcaagtatgacatcctgcagtgtccccagcactga
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