Corvus cornix (hooded crow): 104689521
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Entry
104689521 CDS
T03546
Symbol
TNFAIP3
Name
(RefSeq) tumor necrosis factor alpha-induced protein 3
KO
K11859
tumor necrosis factor, alpha-induced protein 3 [EC:
3.4.19.12
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04217
Necroptosis
ccw04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
104689521 (TNFAIP3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
104689521 (TNFAIP3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccw01002
]
104689521 (TNFAIP3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccw04121
]
104689521 (TNFAIP3)
Enzymes [BR:
ccw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104689521 (TNFAIP3)
Peptidases and inhibitors [BR:
ccw01002
]
Cysteine peptidases
Family C64
104689521 (TNFAIP3)
Ubiquitin system [BR:
ccw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
104689521 (TNFAIP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-A20
OTU
Motif
Other DBs
NCBI-GeneID:
104689521
NCBI-ProteinID:
XP_010397976
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All DBs
Position
3:50467134..50483907
Genome browser
AA seq
809 aa
AA seq
DB search
MSSRNMAGQHILPQALYQSNMLKAMKIRERTPEDLVKPPGGIIHHFRTMHRYTIEMFRMC
QFCPQFRETLQKSLTDQATQTSLERQRKLNWCREVRRLVPLKTNGDGNCLMHAASQYMWG
IEDIDLVLRKTLFSALREIDTRNFKLRWQREAVKSQEFVETGLHYDTRNWEEEWEYLIEM
TSPEISGARNRLPYNALEEIHIFILANILRRPVIVLADKVVRSLESGSSFAPLNVGGVYL
PLLWPAEECYRYPIVLGYDNMHFTPLVTLKDSGPEIRAVPLVTSEQGRFEDLNVHFLTDA
EEREKEQLLKDYLIVMEIPVQGWDHGTTHLINAAKLDEGNLPKEINLVEDYFQLVQHEYK
KWQENAEPARREMCSRNRQELSLSQLSLLQMKCETPNCPFYMSVNTQPYCHECFEQRSQA
NKGRKQTSKAAPEKLKAPGSGLPRGDICEPGGWTSEGPVTEPRSAPPTAPSLFLYSETTA
MKCRTPDCPFTLNVQHNGLCERCYNSRQLGPCNNLDDQRHLDYATCKMCCQKAKRTFNGI
CSTCFKRSTEQSPDDSPAFLPTCHQRSTSDPSQISQILHQHSCYQAPNSHGKEPPQPAQP
PEENRGGNLCRKPGCKFFGTSQNEGFCTLCFFEYRENHDSVLLRQQRRSQRKSSAADETG
SSAAGFRNTVSCQRRDCGTLGSTMLEGYCQNCFIIAQNQRFQEARRTEQQLVRQPERTGQ
HRDVQRAALSTQKRQCGVASCRNNLACRSDDLCPECRRLSQLPPSGSAREPAAQEPPKQR
CRAPACDHYGNAKCNGYCNECYQFKQIYG
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctagaaacatggctggccaacacatccttcctcaagctttgtatcagagcaat
atgctgaaggctatgaagatcagagagaggacacctgaggatctagtcaaacctcccggt
ggaataattcatcacttcaggactatgcacagatataccatagaaatgttcagaatgtgc
cagttttgtccacagtttcgggaaacgcttcagaagtccctgactgaccaggctacccag
acttcactggagcgccagaggaagctcaactggtgcagggaagttcggagacttgttcct
ttgaagactaatggtgatggaaattgccttatgcatgcagcatcacagtacatgtggggc
attgaagatatcgaccttgtcttaagaaaaacattgtttagtgctctcagggagattgac
acacggaacttcaagctccgctggcagcgggaggctgttaaatcccaggagtttgtagaa
acgggactccattatgacacccggaactgggaggaggagtgggaatacctcattgaaatg
acctccccagaaatatctggggctcgaaacaggcttccttataatgcactggaagaaatc
cacatcttcatccttgctaacatcctcagaaggcccgtcattgtccttgcagataaagtg
gttagaagcttagagtcaggttccagttttgctcctttgaatgttggtggtgtttacttg
cctctcctgtggccagctgaagaatgctacagatacccaattgtgcttggctatgacaac
atgcattttacaccactggtgactctaaaggacagcgggccagaaatccgggctgtccct
ctggtcaccagtgaacaaggcagatttgaggatttgaatgtgcactttctgacagatgca
gaagagagggagaaagagcagctgctaaaagactacttgatagtgatggaaattccagtg
caaggctgggatcatggtacaactcatctaattaatgctgcaaagttagatgaaggcaac
ctacccaaagaaataaacctcgtggaagattactttcagctggtacagcatgagtacaag
aagtggcaggagaatgctgaacccgctagaagagagatgtgttccaggaatagacaggaa
ctgtcactttcccagctctcactcttacagatgaaatgtgaaacgccaaattgccctttc
tacatgtctgtgaacacccagccctactgccacgaatgctttgagcagaggtcccaggca
aacaaaggaagaaagcagacctccaaagcagcacctgagaagctgaaggcacctgggtca
ggcttgccccgtggggatatttgtgaacctgggggatggacatctgaaggacctgtaaca
gagcctcgctctgcacctccaaccgctccgagccttttcctgtacagtgaaaccacagcc
atgaagtgcaggaccccagactgcccctttacattgaatgtgcaacacaatgggctgtgt
gaacgctgctacaactccagacagcttggtccctgcaacaacttggatgaccagagacac
ttagactatgccacatgcaaaatgtgctgtcagaaggccaagaggaccttcaatggtata
tgcagcacttgcttcaaaaggtctacagagcagtccccagatgacagtcccgctttcctg
cccacctgccaccagagatcaacgtcagacccgtcccagatctcacagatcctccaccag
cactcctgttatcaggctcccaacagccatggcaaggagcccccacaaccagcacagcct
cctgaggagaacaggggaggcaacctctgtaggaaacctggttgcaagttttttgggaca
tcacaaaatgagggtttttgcacgctgtgtttctttgagtaccgggaaaaccatgacagt
gttctgctacgccagcagaggagatctcagaggaagtcttcggcagcagacgagacaggg
agctccgctgccggcttccgtaacactgtgtcctgccagcggcgcgactgcggcaccctg
ggcagcacaatgctcgaggggtactgccagaactgcttcattatagcccagaaccagcga
ttccaagaagccagaaggacagaacagcaactggtgagacagccagaaagaacagggcag
cacagagatgtgcagcgagcagcactgagtacccagaagagacagtgtggtgtggcttcg
tgtagaaacaacctggcctgcagaagtgatgacctgtgcccggagtgccggcgcctcagt
cagctcccaccgtcggggagtgccagggagccagcggcacaggagcctcccaagcagcgc
tgccgagcccctgcctgtgatcactatggcaatgccaagtgcaacggctactgcaatgaa
tgctaccagttcaaacagatctatggctag
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