Corvus cornix (hooded crow): 104689698 Help Entry 104689698         CDS       T03546                                  Symbol SQSTM1 Name (RefSeq) sequestosome-1 isoform X1   KO K14381   sequestosome 1 Organism ccw  Corvus cornix (hooded crow) Pathway ccw04137   Mitophagy - animal ccw04140   Autophagy - animal ccw04217   Necroptosis ccw04218   Cellular senescence Brite KEGG Orthology (KO) [BR:ccw00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     104689698 (SQSTM1)    04137 Mitophagy - animal     104689698 (SQSTM1)   09143 Cell growth and death    04217 Necroptosis     104689698 (SQSTM1)    04218 Cellular senescence     104689698 (SQSTM1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ccw04131]     104689698 (SQSTM1)    03029 Mitochondrial biogenesis [BR:ccw03029]     104689698 (SQSTM1)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ccw04147]     104689698 (SQSTM1) Membrane trafficking [BR:ccw04131]  Autophagy   Mitophagy    Cargo receptors     104689698 (SQSTM1)   Pexophagy     104689698 (SQSTM1)   Aggrephagy     104689698 (SQSTM1)   Xenophagy     104689698 (SQSTM1)   ER-phagy    ER-phagy recepters     104689698 (SQSTM1)   Other autophagy associated proteins    Midbophagy     104689698 (SQSTM1) Mitochondrial biogenesis [BR:ccw03029]  Mitochondrial quality control factors   Mitophagy factors    Parkin-dependent mechanism factors     104689698 (SQSTM1) Exosome [BR:ccw04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    104689698 (SQSTM1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UBA_5 ZZ PB1 Motif Other DBs NCBI-GeneID:  104689698 NCBI-ProteinID:  XP_039415677 LinkDB All DBs Position 13:complement(7373838..7378275) Genome browser AA seq 453 aa AA seqDB search MAALTVKAYLLGKEETAREIRRFSLPPPARYRAIYDRVAELFQGLLRAGPPPAFRMHYKD EDGDLIAFSTDEELELAMPYVQDGVFRVYIKEKKECKREHRSQCSQEPPRNMVHPNVICD GCEGPVVGTRFKCSVCPDYDLCSTCEGKGIHKEHNMVMFQSPLLNPFEWLPRGRWLRKMR HGVPPFPWMHCWGYPGPAAPCQNSEQAEATAAAPSAPAAEEASTNSQPQDPNVTFLKNVG ESVAAFLSPLGIEVDIDVEHRGKRSKVTPTSANQENTNAEATNSTPTQNVQTNADWNNTD SATQVNVVAEQIQDMVIDPVPTQMEDGSFHSQEHSESSSSSGGEEDWTHLSSKEVDPSTG ELQSLQMPDTDGPSSLDVPRDPPQPGPTGLREAALYPHLPPEADPRLIESLSQMLSMGFS DEGGWLTRLLQTKNCDIGAALDAIQYSKQPPHL NT seq 1362 nt NT seq  +upstreamnt  +downstreamnt atggcggcgctgacggtgaaagcctacctgctgggcaaggaggagacggcccgcgagatc cgccgcttctccctgccgccgcccgcccgctaccgggccatctacgaccgtgtcgccgag ctcttccaggggctgctgcgggccgggccgccgcccgccttccgcatgcactacaaggat gaggacggggacctgatcgctttttccaccgacgaggagctggagttggcgatgccgtat gtgcaggatggcgtattccgtgtttacatcaaagagaaaaaggagtgcaagcgggagcac cgctcacagtgcagccaggagcctccccgcaacatggtgcaccccaatgtcatctgtgat ggctgtgagggacccgtggtggggaccaggttcaagtgcagtgtctgtccagactatgac ctgtgtagcacctgtgaggggaaaggaatccacaaggagcacaacatggtgatgttccaa agcccactgcttaatccatttgagtggcttccccgaggacgctggctccgtaaaatgcgc catggtgttccacccttcccgtggatgcactgctgggggtatcctgggcctgcagctccc tgccagaactcagagcaagctgaagccactgctgcagcccccagtgcacctgctgcagaa gaagcttctactaacagccagcctcaggaccccaatgtcaccttcctaaagaatgttggg gagagtgttgcagcttttctgagccccctgggtattgaagttgatatcgatgtggaacac agaggaaagagaagcaaagtgactcccacttctgccaaccaagagaataccaatgctgag gcaaccaacagtactccaacccagaatgttcagaccaacgcagactggaataatacagac tctgctacacaagtaaacgttgttgcagaacagatacaagacatggtgatagatcctgtg cccacacaaatggaagatggaagcttccactcccaggagcacagtgagtccagcagttca tcggggggtgaggaggactggacccacttatcatccaaagaagtggatccttccacaggt gaactgcagtctttgcaaatgccagacacagatggtcccagctccctggatgtgcctcgg gatcctccccagccaggacctacaggactgcgagaagctgctctctacccacacctcccc ccagaagcagaccctcgcctcattgagtccctgtcccagatgctctccatgggcttctct gatgagggtggatggctcactcggctcctgcagaccaagaactgtgacattggggcagca ctagatgccatccagtattctaagcagccacctcacttgtag

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