Corvus cornix (hooded crow): 104690699
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Entry
104690699 CDS
T03546
Symbol
SEPSECS
Name
(RefSeq) O-phosphoseryl-tRNA(Sec) selenium transferase isoform X2
KO
K03341
O-phospho-L-seryl-tRNASec:L-selenocysteinyl-tRNA synthase [EC:
2.9.1.2
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw00450
Selenocompound metabolism
ccw00970
Aminoacyl-tRNA biosynthesis
ccw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
104690699 (SEPSECS)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104690699 (SEPSECS)
Enzymes [BR:
ccw01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.2 O-phospho-L-seryl-tRNASec:L-selenocysteinyl-tRNA synthase
104690699 (SEPSECS)
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GFIT
Motif
Pfam:
SepSecS
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
104690699
NCBI-ProteinID:
XP_019142704
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Position
4:54926794..54949462
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AA seq
426 aa
AA seq
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MDSNNFLGNCGVGEREGRVVSGLVARRHYRLIHGIGRSGDISAVQPKAAGSSLLNKLTNS
VVLDVIKLAGVRTVTGCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMI
TAGFEPVVIENVLEGDELRTDLEAVETKIKALGAENILCVHSTTSCFAPRVPDRLEELAV
ICANYDIPHIVNNAYGLQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFSE
SFIQEISKMYPGRASASPSLDVLITLLSLGTSGYKKLLKERKEMFLYLSCELKKLADNHN
ERLLETPHNPISLAMSLKNLDETNDAAVTQLGSMLFTRQVSGARVVPCGSVQTVNNYTFK
GFMSHANDYPCAYLNAASAIGIKKQDVDVFLKRLDKCLKTFRKEGKQEKCINEISDSNAA
TEQLED
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggatagcaataacttcctgggcaactgtggcgttggtgaaagggaaggaagagtggtg
tcagggcttgttgcccgaaggcattacaggttgattcatggaattggaagatcgggtgat
atttctgcagtacagcctaaggctgcaggttcaagccttttgaacaaacttactaattca
gtagttctggatgttataaaactggctggtgtccggacagtgactggttgctttgtggtt
cctatggcaacaggcatgagtctaactctgtgttttttaacattgaggcacaagagacca
aaggcaaaatacattatctggcctcgtatagaccagaaatcttgctttaaatcaatgata
actgcaggttttgagcctgtggtgatagaaaatgtattagaaggtgatgagctacggaca
gacctcgaagcagtggagaccaaaatcaaggctcttggtgctgaaaatattctttgtgtg
cattctacaacatcttgctttgctccaagggtacctgataggctggaggaactggctgtg
atttgtgctaattatgacattccacatattgtcaacaatgcatatggacttcagtcttca
aaatgtatgcatcttatccagcagggtgctcgagttggcagaatagatgcttttgttcag
agcttggacaaaaactttatggttccagtaggtggtgctatcattgctggcttcagcgag
tccttcattcaggagatcagcaaaatgtatccaggaagagcatctgcatctccttcttta
gatgtcctcattacacttctgtctctgggaaccagtggctacaaaaagttactgaaagag
agaaaggagatgtttttgtatctttcatgtgagctgaagaagctggcagataaccacaat
gagagactgttagagacaccacataatcccatttccttagccatgtcactgaagaatcta
gatgaaactaacgatgctgctgttacccagcttggatctatgcttttcacaagacaagtt
tctggagcaagggttgttccctgtggatctgtgcaaactgtgaataactacacttttaaa
ggctttatgtcacatgcaaatgactatccttgtgcttacctcaatgctgcctcagcaatt
ggaattaaaaagcaagatgtagatgtattcctaaaaagacttgacaagtgtttgaagacc
tttagaaaagaaggaaagcaagaaaagtgtataaatgaaataagtgattctaatgcagcc
acagaacaacttgaagactag
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