Corvus cornix (hooded crow): 104693870
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Entry
104693870 CDS
T03546
Symbol
RAPGEF4
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04081
Hormone signaling
ccw04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
104693870 (RAPGEF4)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
104693870 (RAPGEF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104693870 (RAPGEF4)
Membrane trafficking [BR:
ccw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
104693870 (RAPGEF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
RA
Motif
Other DBs
NCBI-GeneID:
104693870
NCBI-ProteinID:
XP_010405066
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All DBs
Position
7:20904378..21063334
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AA seq
1010 aa
AA seq
DB search
MGVQNEPLERSSEDVDIIFTRLKEVKAFEKFHPNLLQQICLCGYYENLEKGITLFRQGDI
GTNWYAVLTGSLDVKVSDTSNHQDAVTICTLGIGTAFGESILDNTPRHATIVTREYSELL
RIEQKDFKALWEKYRQYMSGLLTPPYGVMETGSNNDRMPDKDSMSSSALCQVSKNCNKTP
LIDPHIPHHPTKTITQVPSEKILRAGKILRNTILSRAPHMIRDRKYHLKTYRQCCVGTEL
VDWMMQQSPCVHLRTQAVGMWQVLLEEGVLNHVDQEHHFQDKYLFYRFLDDEREDAPLPT
EEEKKECDEELQDTMLLLSQIGPDAHMRMILRKPPGQRTVDDLEFIYEELLHIKALSHLS
TTVKRELAGVLIFESHPKAGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDF
GKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLKEHDQDVLVLEKIP
AGNRISNQGNSQPQHKYIVMSGTPEKILEHFLETMRLEATLSEATDSVLNDFIMMHCVFM
PNSQLCPALMAHYHAQPSQGTEQEKMDYALNNKRRVIRLVLQWAALYGDLLQEDEAAMAF
LEEFYVSVSDDTRMIAALKEQLPELEKIVKQISEEPKASQKKHKVLLQLFNTSDDRAQKR
QPIRGSDEVLFKVYCIDQTYTTIRVPVSSSVKEVISAVADKLGSGEGLIIVKMSSGGEKV
VLKPHDVSVFTTLSVNGRLFACPRDQFDSLAPLPEQEGPSTGTVGTFELMSSKDLAHQMT
VYDWELFNCVHELELIYHTFGRHNFKKTTANLDLFLRRFNEIQFWVVTEICLCSQLSKRV
QLLKKYIKIAAHCKEYKNLNSFFAIIMGLSNVAVSRLSLTWEKLPSKFKKIYAEFESLMD
PSRNHRAYRLTVAKLDPPIIPFMPLLIKDMTFTHEGNKTFTDNLVNFEKMRMIANTVRTV
KFCRSQSFNPDAALTNKNHQDVRSYVRQLNVIDNQRTLSQMSHRLEPRRA
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgggagtacaaaatgagcctttggaacgttctagtgaagatgtagatataatattcaca
cgactgaaagaagtgaaagcttttgagaaatttcatccaaaccttctccagcagatatgt
ctctgtggatattatgaaaatctggaaaaaggaatcacattattccgtcagggtgatatt
gggacgaattggtatgctgtcctgacaggatcactggatgtgaaggtgtctgatacaagc
aaccaccaggatgctgtgacaatatgcacccttggaataggaactgcttttggagagtcc
attctggataacactcctcggcatgctaccatcgttaccagggaatatagtgagctcctt
cgaattgagcagaaggacttcaaagcactttgggagaaatatcgacagtatatgtctgga
cttctcactcctccttatggtgttatggaaactggctccaacaatgacagaatgccagat
aaagacagtatgtcaagcagtgctctttgccaagtttctaaaaattgtaataagacacct
cttattgatcctcacatcccacatcatcctactaaaaccattacacaggttccttcagaa
aagatcctcagagctggaaagattttgcggaatacaattttgtcccgagctcctcacatg
ataagagaccgtaaataccatctgaagacttacaggcaatgttgtgtggggacagaacta
gttgactggatgatgcagcaaagtccttgtgtccatttacgaacccaggctgttggaatg
tggcaagtactgctggaagaaggtgttcttaaccatgtggaccaagaacaccactttcaa
gacaagtacttattttatcgatttttggatgatgaacgtgaagatgcccctttgccaact
gaggaagagaaaaaggagtgtgatgaggagctacaggatactatgctgcttctctctcag
attgggccagatgctcatatgaggatgattctcaggaaaccccctggccagagaactgta
gatgatttagaatttatatatgaagaacttctccacattaaggccttatctcatctttct
actacagtaaaacgagaattagcaggtgtcctcatttttgagtcacatcccaaagcagga
acagtcttatttaatcaaggagaagaaggtacttcttggtacattatcctaaagggatca
gtaaacgtagtcatttatggaaagggtgtggtatgtactctacacgaaggagatgatttt
ggcaagttagcacttgtgaatgatgctcccagagcagcatccattgttctgcgggaagac
aactgccacttcctgagagtagataaggaggacttcaacaggatcctaagggatgtggaa
gcaaatacagtaagactgaaagaacatgaccaggatgtcttggtgttggagaagatccca
gcaggaaacagaatttctaatcaaggaaattcacagccacagcacaagtatattgtgatg
tcaggaaccccagagaaaattttagagcactttctagaaactatgcgccttgaagcaact
ttaagtgaagcaacagattctgttttaaatgattttattatgatgcactgtgtttttatg
ccaaatagtcagctctgcccagccttgatggcacactatcatgcccagccttctcagggt
acagagcaggagaaaatggattatgccctcaacaacaaaaggcgagtcattcgactggtt
ctgcagtgggctgctttatatggagatttactgcaagaagatgaagcagcaatggccttt
ttggaggaattttatgtatctgtatcagatgatactagaatgattgcagcactaaaggag
caacttccagagctagagaaaattgtaaagcaaatttctgaagaacctaaagcatcacaa
aagaagcacaaagttcttctgcagctgttcaacacaagtgatgacagagcacagaaacgc
cagcctatcaggggcagcgatgaagttctgtttaaggtgtactgcatagaccaaacctac
accactatccgggtgccagtgtcttcttctgtgaaggaagtgatcagtgcagtagcagac
aagctgggctctggagaaggcctcatcatagtgaagatgagttcaggaggagaaaaggtt
gtgctcaagcctcacgatgtttcagtgttcaccactctcagtgttaatggccggctgttt
gcttgcccacgggatcagttcgattcactggcaccattaccagaacaggaaggaccatct
actggtacggtaggaacatttgaactgatgagttccaaagacttagcacatcagatgaca
gtttatgactgggagctcttcaactgcgtgcatgagctggaattgatctatcacactttt
ggaaggcacaattttaaaaagaccacagcaaatctggacttgtttttgagaagattcaat
gaaatccagttctgggtggtcactgagatttgtctttgctctcaactcagcaagcgtgtt
cagctgttaaagaaatacattaagatagcagcccactgtaaagaatacaaaaatctgaat
tccttttttgctattattatgggactgagtaatgttgccgtgagccgtctctcattgacg
tgggagaaactcccaagcaagttcaagaagatctatgcggagtttgaaagcttaatggat
ccatcaagaaaccatagggcctacagactaactgtagctaaattggaccctccaataatt
cctttcatgcctctacttataaaagacatgacatttactcatgagggaaacaagacattc
actgacaatctagtaaacttcgaaaaaatgcgcatgattgccaacactgtcaggacagtg
aaattctgccgaagccaatctttcaatcctgatgcagccctaactaataaaaaccatcag
gatgttcggagctatgtgcggcaattaaatgtgattgacaaccagagaactttatcacag
atgtctcaccgactggaaccgcgccgagcataa
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