KEGG   Corvus cornix (hooded crow): 104696532
Entry
104696532         CDS       T03546                                 
Symbol
RBX1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw03420  Nucleotide excision repair
ccw04110  Cell cycle
ccw04114  Oocyte meiosis
ccw04120  Ubiquitin mediated proteolysis
ccw04141  Protein processing in endoplasmic reticulum
ccw04310  Wnt signaling pathway
ccw04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    104696532 (RBX1)
   04120 Ubiquitin mediated proteolysis
    104696532 (RBX1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    104696532 (RBX1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    104696532 (RBX1)
   04350 TGF-beta signaling pathway
    104696532 (RBX1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    104696532 (RBX1)
   04114 Oocyte meiosis
    104696532 (RBX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccw04121]
    104696532 (RBX1)
   03400 DNA repair and recombination proteins [BR:ccw03400]
    104696532 (RBX1)
Enzymes [BR:ccw01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     104696532 (RBX1)
Ubiquitin system [BR:ccw04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   104696532 (RBX1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     104696532 (RBX1)
   Cul2 complex
     104696532 (RBX1)
   Cul3 complex
     104696532 (RBX1)
   Cul4 complex
     104696532 (RBX1)
   Cul7 complex
     104696532 (RBX1)
   Cul8 complex
     104696532 (RBX1)
   Cul9 complex
     104696532 (RBX1)
DNA repair and recombination proteins [BR:ccw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      104696532 (RBX1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      104696532 (RBX1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003 PHD_NSD
Other DBs
NCBI-GeneID: 104696532
NCBI-ProteinID: XP_039427558
LinkDB
Position
1A:complement(49194988..49205849)
AA seq 108 aa
MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggccgcaatggatgtggacacccccagcggaaccaacagcggcgccggcaagaag
cgcttcgaagtgaagaaatggaatgccgtagctctgtgggcatgggacattgtggttgat
aactgtgccatttgcagaaaccacattatggatctatgcatagaatgtcaagcaaaccaa
gcatcggctacctctgaggagtgcacagttgcatggggcgtctgcaatcacgctttccac
ttccactgcatctctcgctggctcaaaactcgccaagtatgtccgctggacaacagggaa
tgggagttccaaaagtatggacactag

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