Corvus cornix (hooded crow): 104696749
Help
Entry
104696749 CDS
T03546
Symbol
TRPM2
Name
(RefSeq) transient receptor potential cation channel subfamily M member 2 isoform X2
KO
K04977
transient receptor potential cation channel subfamily M member 2 [EC:
3.6.1.13
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
104696749 (TRPM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccw04040
]
104696749 (TRPM2)
Enzymes [BR:
ccw01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.13 ADP-ribose diphosphatase
104696749 (TRPM2)
Ion channels [BR:
ccw04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104696749 (TRPM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Csx1_HEPN
LDcluster4
Motif
Other DBs
NCBI-GeneID:
104696749
NCBI-ProteinID:
XP_019148465
LinkDB
All DBs
Position
9:complement(22938415..22956864)
Genome browser
AA seq
1507 aa
AA seq
DB search
MSARGRCAKVLPSELNKVCPERGDEPATQPRKMSDFEVVPNLQQSSSSVSKSRRKAHFPT
GSNEKENLISWIPENIRKKECTYFVESSQTSDSGRIVCECGYLREQHLDDAAKPPIFLGK
EWDPRRHIQEMPTDAFGDIRFTGLGQKTGKYVRVSSDTPPRVIYHLMTQHWGLDAPNLLI
SVTGGAKNFIMKPRLKNIFRQGLVKVAQTTGAWIITGGSHTGVMKQVGEAVRDFILSCSH
KEGDIVTIGIATWGTVYNRDSLVCPMGGFPAEYVLDEENQGSLSCLDSNHSHFILVDDGT
HGRYGVEIPLRTRLEKFISEQTKVKGGVAIKIPIVCVVLEGGPGTLDTIYNTITNGTPCV
IVEGSGRVADVIAQVANLPVAKITIALIQKKLSILFHDTYELFTESKLVEWTKKIQDIVR
SRQLLTIFREGKYGQQDVDVAILQALFKASRNQDHFGRENWDHQLKLAVAWNRVDIARSE
IFTDDHDWKPSDLHPVMAAALISNKPEFVKLFLEQGVRLKEFVTWDTLVYLYDNLAPSCL
FHSKLQKVLLEEREHTAGSKMPRLQMHHVSQVLRELLGCSTQPLYPKPKHTERPRLSIPV
PHIKLNVQGSSLRSLCKRSAGRVTFTMDPVRDLLIWAVVQNRKELAEIIWAQSQDCMAAA
LACSKILKELAKEEEDTDTTDDMLALAEEYEHKAIGVFTDCYRKDEERAQKLLTRVSEAW
GKTTCLQLALEAKNMNFVSHGGVQAFLTKVWWGKLCVDNGLWRVITCMLFFPLLYTNLIT
FREKRLQPMGCLTRLRAFFTAPIVIFLMNILSYFTFLLLFAYVLMVDFQPMPTWREYLIY
FWLFSLVCEETRQLLYDPDGLGVVKMASLYIKDFWNKLDICAILVFIAGLTCRLIPSTLY
PGRIILSLAFIIFCLRLMHIFTVSKTLGPKIIIVKRMMKDVFFFLFLLAVWVVSFGVAKQ
AILIHNEERVEWLFRGVVYHSYLTIFGQIPSYIDGVNFNIDQCSPNGTDPYKPKCPETNA
DNKKPIFPEWLTVILLCLYLLFTNILLLNLLIAMFNYTFQQVQEHTDQIWKFQRHDLIEE
YHGRPPAPPPLILLNHLQLLVRRGLLRRPATHHKLKEKLEKNEEAALLSWEMYLKENYLQ
HQQCQEKQNTEQMIRDIAQRVDVLAELLDLDRVKRTGVVEQRLGSLEDQVQQSAQALRWM
MQALRGNGFSSGEDVPPVGSSKVLDTKEIDLEGRPEESQPPCHVLARNLLYPGSHTLRFP
VPDEKVPWEVDFPLYDPPAYSADHKDMAVQDPFSLSLESLLKINYNTMDGLIDRQSFHGL
YAVQDGLPLNPMGRTGLRGRGRLHCFGPNHALHPVVTRWRRNLDGSIIRKSLKKMLEVLV
AQYPLSDVWALPGGSLEPGETLPLKLKWILRREFWPQFQNLLKQGTEVHKGYLDDPRNTD
NAWVETVAISVHFDTQNDVEMKRLNSFLQGCDPELCIRWQVLDKRIPLHANHKELLHKVS
TLLGAYY
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgcgtggccggtgcgccaaggtgctcccctccgaactgaacaaggtgtgcccc
gagagaggagatgagcctgccacacagcccaggaagatgagcgactttgaggtggtgccc
aacctgcagcagagcagtagcagcgtctcgaagagcaggcggaaggctcatttccccact
ggcagcaatgaaaaggaaaatctcatctcctggattcctgaaaacatccggaagaaggaa
tgcacctattttgtagaaagctcccagacatcagattctgggaggatcgtttgtgagtgt
ggctatctcagggaacagcacctggacgatgctgccaaacctcccatcttcctggggaag
gaatgggatccccgcaggcacatccaggaaatgccaacggatgccttcggcgatatccgc
ttcacaggcctgggacagaagacagggaagtatgtgcgtgtctcctcggatacccctcca
cgggtcatctaccacctcatgacacagcactggggcctcgacgcacccaacctgctcatc
tcagtcaccgggggagccaaaaacttcatcatgaagccaaggctgaagaacatcttccgg
caagggctagtcaaggtggcccagaccacaggagcctggatcatcacgggggggtcccac
actggtgtgatgaaacaggtgggagaggcagtgcgagacttcatcctgagctgcagccac
aaggagggcgacatcgtcaccatcggcattgccacctgggggaccgtgtacaaccgggac
agcctcgtctgccccatggggggctttcctgctgagtatgtgctggatgaggagaaccaa
ggcagcttgtcatgcctggacagcaaccattcccacttcatcctggtggatgatggcacc
cacgggaggtatggggtggaaatccccctgaggaccaggctggagaagttcatttcagag
cagaccaaggtgaaaggaggcgtggccatcaagatccccatcgtgtgtgtggtgctggaa
ggaggccctgggactcttgataccatctacaacaccatcaccaacgggaccccctgtgtg
attgtggaagggtccggccgtgtggctgatgtcatcgcccaggtggccaatctgcccgtg
gccaagataaccatcgccttgatccagaagaaactgagcatcctcttccacgacacctat
gagctcttcaccgagagcaaactggtggagtggaccaagaagatccaagacatagtgcgg
agccggcagctcctgaccatcttcagagagggcaaatatggccagcaggatgtggatgtg
gccatcctccaggccctcttcaaagcatcccgaaaccaggaccactttggtcgtgagaac
tgggaccaccagctgaagttggctgtggcctggaacagggtggacattgcccgaagcgag
atcttcaccgatgaccacgactggaagccctcagatctccaccccgtgatggcagctgcc
ctgatttccaacaagccagagtttgtgaagctgttcctggagcagggagtgcgtctcaag
gagtttgtcacctgggacaccctggtttacctctacgacaacctggccccgtcctgcctg
ttccacagcaagctgcagaaggtgctgctggaggagagagagcacacagccggctccaaa
atgccaaggctccagatgcaccacgtctcccaggtgctgcgggagctgctgggctgctcc
acacagccgctgtaccccaagcccaagcacacggagcggccccggctctccatccccgtg
ccgcacatcaagctgaacgtgcaggggtcaagtctccggtccctctgcaagcgctctgct
ggccgagtcaccttcaccatggaccccgtccgggacctgctcatctgggccgtggtccag
aaccgcaaggagctggcagaaatcatctgggcccagagccaggactgcatggcagctgcg
ctggcctgcagcaaaatcctgaaggagctggccaaggaggaggaggacacggacaccacc
gatgacatgctggccctggctgaggagtacgagcacaaggcaatcggcgtgttcacagac
tgctaccgcaaggatgaagagagagcccagaagcttctcacccgtgtctctgaagcctgg
gggaagacaacctgtctgcagctggcgttggaggccaagaacatgaattttgtgtcccat
gggggtgtccaggcttttctaaccaaggtctggtgggggaagctgtgtgtggacaacggg
ctttggcgggtgattacgtgcatgctgttcttccccctgctctacaccaacctcatcacc
ttcagggagaagaggctgcagcccatgggctgcctgacacgtctccgagccttcttcaca
gcacccatcgtcatcttcctcatgaacatcctctcctacttcaccttcctcctgctcttc
gcatacgtcctgatggttgacttccagccgatgccaacctggcgggaatacctcatctac
ttctggctcttctccctggtgtgcgaggagacccgccagctgttgtatgacccagatgga
cttggggtagtgaaaatggcttccctgtacatcaaggacttctggaataagctggacatc
tgcgccattctggtctttatcgcagggctgacttgcaggctgatcccatcaacattatat
cctgggcgcatcatactgtccctggcttttataattttctgcctgcgcctgatgcacatt
ttcacagtcagtaaaacactggggcccaagatcatcattgtgaagcgcatgatgaaggat
gtcttcttctttctcttcctgctggcagtgtgggtagtgtcctttggggtggccaagcag
gctatcctgatccacaacgaggaacgcgtggagtggcttttccgtggcgtggtctatcac
tcctacctgaccatctttgggcagattccctcctacatcgatggggtcaacttcaacatc
gaccagtgcagccccaatgggactgacccctacaagcccaagtgtccagagacaaacgcg
gacaacaagaaacccatcttcccagaatggctgacggtcatcttgctgtgcctgtacctg
ctcttcaccaacatcctcctcctcaacctcctcatcgccatgttcaactacaccttccag
caggtgcaggagcacacggaccagatctggaagttccagcggcacgacctgatcgaggag
taccacggccgcccacccgcgcccccacccctcatcctgctcaaccacctgcagctcctg
gtccggcggggcttgctccgccggccggccacgcaccacaagctcaaggagaagctggag
aagaacgaagaagctgcccttctctcatgggagatgtacctgaaggagaactacctgcag
caccagcagtgccaggagaagcagaacacggagcagatgatccgggacattgcacagagg
gttgatgtactggcagagctgctggacttggaccgggtgaagaggacaggggtagtggag
caaagactgggctctctggaggaccaggtgcagcagagtgcccaggccctgaggtggatg
atgcaggcgctgaggggcaatggcttcagctcaggcgaggatgtgccgcccgtgggctcc
tccaaagtcttggacaccaaggagattgacctggaggggagacccgaggagagccagccc
ccgtgccacgtgcttgcccgaaacctcctgtaccctgggtctcacactctccgcttccct
gtgccagatgagaaggtgccctgggaggtggatttcccactctacgacccccctgcctac
tcggccgaccacaaggacatggctgtgcaggaccccttcagcctctccttggagtctctc
ctgaagatcaactacaacaccatggacgggctgatcgaccggcagagcttccacgggctc
tacgccgtgcaggacgggctgccactgaaccccatgggcaggacggggctgcgaggccgt
gggaggctgcactgctttgggcccaaccatgccctgcaccctgttgtgacccgctggagg
aggaatttggatgggtccattataaggaagagcctgaagaagatgctggaagtcctggtg
gcccaatatccgttgtcagatgtctgggctctgcctggggggtcactggagccaggtgag
acactgccactgaagctcaagtggatcctgcgccgggagttctggccccagttccagaac
ctgctgaaacaaggcactgaggtacacaaggggtacctcgacgacccacgcaacacagat
aacgcctgggtggagacggtcgccatcagcgtgcacttcgacacccagaacgacgtggag
atgaagcggctgaattcgttcctccagggctgcgacccagagctgtgcatccgctggcag
gtgctggacaagaggatccccctgcacgccaaccacaaggagctcctgcacaaggtctca
accctcctcggtgcctactactga
DBGET
integrated database retrieval system
