Corvus cornix (hooded crow): 104697892
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Entry
104697892 CDS
T03546
Symbol
HPS6
Name
(RefSeq) LOW QUALITY PROTEIN: Hermansky-Pudlak syndrome 6 protein
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104697892 (HPS6)
Membrane trafficking [BR:
ccw04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
104697892 (HPS6)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HPS6_C
HPS6
Motif
Other DBs
NCBI-GeneID:
104697892
NCBI-ProteinID:
XP_039409569
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Position
6:13735921..13739056
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AA seq
887 aa
AA seq
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MAPPSAGSRGSSPERGPTAHPAPAAEVGAGRPGAARSGCARKPRGPVTAQRRAELPPAPA
PVGSRRRGRMKLQQVSDLSDFSRGHWLAGVVVPRRRAPATSSPAPDGQHLLLLQKSRPPT
LPRVVAFQRHSIAGADLERTWQPPQPALVELLFLQSPVVLGSWVLAVVWEHGRTEVWHFV
VAVGWQLLQTLELCQGARARVISVCSQGASLVWCEERPPLGAHSDMSKCAFRFCVCARAL
EVGEQGVRLGAVRIVLHNSPEYQVLASPQHIFLVPAAAAGFATTSKFLLIWHPEKAKFTI
TAPSAGFIHSKVLHSSSESDFRKLLLGSVGLLSGFAPLDIHTSTVSNSGGLLLVSTKGSV
SVVEPDGTQRHIFDLEGGPLAQGSPVRLKTFGSILACVLAGVVYLVDQNSGRLIEKEVLS
MKEVHFLESQGEEDSIQLLTQTGIYSFSFSKPEDSSRPEPCLVEMVFEEACRYYQRRSLS
SSKLTVEKLKKGGAFQAPVVLAAILQHSLHQKQKPARGLQDTYAKLLSTLSLELQSYMSL
ELLKTCVVCAPESEVESYCNELVEQEVSRILQSDMDKDNLAYLNSVFASFPKAAWKATRS
CLQLQQNGDGLLVARATPEVWKKVLCQPQLEEVGQNGMVPLYELICASFLRFKPKWLPSF
VELTQQYISNSWSYSSKEGPEGRVPLYKRALGVLARKNKHGEADDEMELELLLCSKRPKA
VLQALHLLIRLKQWQRVVEVAEKFSKLSPLLNKEIFTTLLAELAQHRELDPYLDRLWPLC
PTELTASDILTVVLQHLPHSQEEDPVPFSSEGNQLTVGLLKPLLQRVVQCPSVQEDIYSD
ALQSTTFPPPTPPXEHKIPSKAVDDDVPQPPMARTSSPSALLQDDGV
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggccccgccgtctgcggggagccgcgggtcgtccccggaacgcggccctacggcacac
cccgcgccagcggcggaagtaggagcgggacggcccggggcggcgcggagcggctgtgcc
cggaaaccccgcggccccgtgactgcgcagcgccgagcggagctgccaccggccccggcc
ccggtcggcagtcgccgccgcggcaggatgaagctgcagcaggtctccgacttgagtgac
ttcagccgaggccactggctggcgggagttgttgtgccgcggagaagagccccagccacg
tccagtccagccccggacgggcagcacctcctgctcctgcagaagagccggccgcccacc
ctgccccgggtggtggccttccagcgccacagcatcgctggagccgacctggagaggacc
tggcagccgccccagccagctcttgtggaactgctcttcctgcagagccctgtggtactg
ggctcctgggtactggccgtggtgtgggaacatggccggaccgaagtctggcactttgtg
gtggccgtgggctggcagctgctgcagacactggagctctgccagggtgcccgggcacga
gtcatctccgtgtgcagccagggagccagcctggtgtggtgtgaggagaggccaccgctg
ggtgctcactcggacatgagcaagtgtgccttcaggttttgtgtctgtgcccgtgctctg
gaggtgggggagcaaggcgtgcggctgggcgctgtgaggatagtcctgcacaacagcccc
gagtaccaggtcctggcttccccccaacacatcttcctagtgcctgctgctgctgccggc
tttgccaccacttccaaattcctcctcatctggcatccagagaaggcaaagttcaccatc
acagccccctctgcaggtttcatccacagcaaggtgctgcactccagcagcgagtcagac
ttcaggaaactcctgctgggttctgtgggccttctctcaggtttcgcacctctggacatt
cacacctccactgtgtccaacagtgggggtctgctgctggtgagcacaaagggttctgtg
agtgtggtggagccagatgggacacagaggcatatctttgacctggaggggggccccctg
gcccaagggagtcctgtccggctgaagaccttcggcagcatcctggcctgtgtgctggct
ggagtagtgtaccttgtagaccagaacagtggaaggcttatagaaaaggaagtcctgagc
atgaaagaggtacatttcctggagtcccagggagaggaggacagtatccagctcctcact
caaactggcatctacagctttagcttctccaaacctgaggacagcagcaggcctgagcca
tgcctggtggagatggtgtttgaggaggcctgcaggtattaccagaggaggagcctcagc
agctccaagttgacggtggagaagttgaagaaaggtggtgcattccaggctcctgtggtt
ctcgctgccatcctgcagcacagcctccaccagaagcagaagccagcccgaggcctacaa
gacacctatgccaagctgttgagcacactgagcctggagctgcagagctacatgagcctg
gagctcctcaagacttgtgtggtgtgtgccccagagagtgaggtggaaagctactgcaac
gagctggtggagcaggaggtcagccgcattctgcagtctgacatggacaaggacaacttg
gcctatctgaactctgtctttgcctccttccccaaggctgcctggaaggccacaaggagc
tgcctgcagctgcagcagaatggggacggcctcttggtagccagggccaccccagaggta
tggaagaaggtcctgtgtcagccacaactggaggaggtgggtcagaatgggatggtccca
ctctatgagctcatttgcgcctccttcctgaggttcaaacccaagtggttgcccagcttt
gtggagctgacccagcaatacattagcaactcttggtcatacagcagcaaggagggccca
gagggccgggtgccgctgtacaagagagcactgggagtgctggcccgaaagaacaaacat
ggtgaggcagatgacgagatggagctggaactgctgctctgcagcaagaggcctaaggcc
gtgctacaagctctgcaccttctcatccgtctgaagcagtggcagcgggtggtggaggtg
gcagagaagttctccaaactcagccccttgcttaacaaggagatattcaccacactcctg
gctgagttggcccagcaccgggagctggacccttacctggacaggctgtggccactgtgc
cccactgagctcactgcctcagacatcctcaccgtggtcctgcagcacctccctcactcc
caggaggaggacccagtgcctttctccagtgaggggaaccagctgaccgtgggcttgctt
aagccactgctgcagagggtcgtgcagtgtcccagtgtccaggaggacatatactcggat
gccctgcagagcaccaccttcccccctcccaccccacccngagagcacaaaatcccctca
aaagcagtggacgatgatgttcctcagccacccatggcaaggacttcctcaccctcagca
ctgctacaggatgacggtgtgtga
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