Corvus cornix (hooded crow): 104697928
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Entry
104697928 CDS
T03546
Symbol
CXCL12
Name
(RefSeq) stromal cell-derived factor 1 isoform X1
KO
K10031
C-X-C motif chemokine 12
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04060
Cytokine-cytokine receptor interaction
ccw04672
Intestinal immune network for IgA production
ccw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
104697928 (CXCL12)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
104697928 (CXCL12)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
104697928 (CXCL12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ccw04052
]
104697928 (CXCL12)
00536 Glycosaminoglycan binding proteins [BR:
ccw00536
]
104697928 (CXCL12)
Cytokines and neuropeptides [BR:
ccw04052
]
Cytokines
Chemokines
104697928 (CXCL12)
Glycosaminoglycan binding proteins [BR:
ccw00536
]
Heparan sulfate / Heparin
Chemokines
104697928 (CXCL12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
104697928
NCBI-ProteinID:
XP_039409647
LinkDB
All DBs
Position
6:17392315..17410405
Genome browser
AA seq
131 aa
AA seq
DB search
MDLRALALLAFALAVISLSEEKPVSLTYRCPCRFYESNVARANIKHLKILSTPNCSLQIV
ARLKSNSKQVCIDPKLKWIQEYLEKALNKPRHRTHKKKQQKKRGPLCPSRATPLKSPGRK
NGGSRCKRQAL
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atggacctccgcgccctggcgctcctcgccttcgccctggccgtcatctccctctcggag
gaaaaacccgtcagcctgacttaccgatgtccctgtcgattctacgagagcaacgtggca
agagccaatattaagcacctcaaaatcctctccacacccaactgctcacttcagattgtt
gcaaggctcaagagcaacagcaagcaagtgtgcattgatcccaagttaaagtggatccag
gagtatctggagaaagctttaaacaaaccacgtcatcgcactcataaaaaaaagcaacag
aagaaacggggcccactctgcccttcccgtgcaacaccactaaagtctccagggagaaag
aatggaggttcaagatgtaagaggcaagcattgtaa
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