Corvus cornix (hooded crow): 104698547
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Entry
104698547 CDS
T03546
Symbol
PLEKHM1
Name
(RefSeq) LOW QUALITY PROTEIN: pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04140
Autophagy - animal
ccw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104698547 (PLEKHM1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104698547 (PLEKHM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104698547 (PLEKHM1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccw04990
]
104698547 (PLEKHM1)
Membrane trafficking [BR:
ccw04131
]
SNARE
SNARE associated proteins
Others
104698547 (PLEKHM1)
Domain-containing proteins not elsewhere classified [BR:
ccw04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
104698547 (PLEKHM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Prok-RING_1
Zn_ribbon_RRN7
PIRT
Motif
Other DBs
NCBI-GeneID:
104698547
NCBI-ProteinID:
XP_039421724
LinkDB
All DBs
Position
27:complement(2852286..2873942)
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AA seq
1035 aa
AA seq
DB search
MHSSHPEDPKEAIQLIKKQLVNAIKALQKQYVSSDAVVTSDDSNANTLCSALEAVFVHGL
KAKHIKAESGGKGKKSGGRGPLPQPVFWGLLKSITHRNIVSELEQLLFINTDVGRCRAWL
RLALNDGLMECYLKLLLRDRARLHEYYQAPALLLDAEECEFLLCYLQGLSSLTFELSYKS
AVLNEWTVTPLSLSGLCPVSELLDPLTSSASEPRRKASLGSISQSSGSDEIEIQAPVLPI
SKASSKIKLTSSSLSLNTTSSSQLSSSLGSDSLPPAPCTRSPERGEEPLSCDSDLGTATA
EDLDRSLQEVLSEFSKARPSPEAPEGRLLPSVLGCSPRPPPXPPVSPARPAPTHGTHQEP
PPSSASSARTGDPAPPRQGNGDASGTSRIPAPQNGLGRAESIGSEGSQAARSPTAQYLLS
PLLGCPTSWISEDDFYRPSPGEGSGSTANTNGFGPEGDSEEPALGLISALDLERLSVPSS
DTGKPKMSPEREQKGFSVVHRRQMGLSNPFRGLLKLGSLERRGAMGIWKEFSCELSPLEL
RLFLDHEDRICVESYSLLRCESLALTHSDGRFELVFLGKKLFLRAPSQDEAEDWLDRIRE
ALRKCRPQLEEEEDWETLENTEDGGEAQPVQGDSSALQYSDVPGNSLDWTAAPEPELDAI
KEAVLYMDVDKTWVPFIFSLSLETLKCFKIRNNEKVLSNSYGIETIQDILPDTSLGGPSF
FKVITSKAVLKLQAENAEEAASWRELVREVLMSYLESAEEALTLGGSLDGHSQVVLKNIV
KENGFLLQYLVAIPMEKGLDSQSFICAGCSRQIGFSFARPKLCAFSGLYYCDSCHRDEET
VIPSRLIHNWDLTKRGVCKQALKFLTQIRNQPLIDLKLVNESLYEHVERMGRILRSREQL
KLLGDYLIMCRSGALKELSKRLDHRHYLLECLHKYSVADLRQIADGVFETFLQSLLQFAS
HHVYSCDLCTQRGFICQICNSSSIIFPFEFDTTTRCSECKTVFHRDCHARAPSCPRCERR
QRYQRRLEASTEPSL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgcattccagccaccccgaggaccccaaggaagccatccagctgatcaagaagcaactg
gtgaatgccatcaaggctctgcagaagcagtacgtgagctcagacgccgtggtcaccagc
gatgacagcaacgccaacacgctctgcagcgccctggaagctgtgtttgtgcacgggctg
aaggcaaagcacatcaaagcagagagtggggggaaagggaagaaatccgggggtcggggc
cccctcccccagccagttttttggggcctgctgaagagcatcacgcaccggaatattgtc
tcagagctggaacaactgttgtttatcaacacggacgtggggcgctgccgcgcctggctg
cggctggcgttgaacgacggcctcatggagtgttacctgaagctgctgctgcgggaccgg
gcccggctgcatgagtactaccaagcaccagctctgctcctggacgccgaggagtgcgag
tttctcctctgctacttgcagggtttatcgtccttgacctttgagctctcctacaagtca
gcagttctgaatgagtggaccgtaaccccgctgtccctgtcgggtctgtgtcccgtgtct
gagctgctggatcccctcacgtcctcagcctccgaaccccgcaggaaagcatcgctgggc
tccatctcccagtcctcggggtcggatgagattgagatccaagcccctgtcctgcccatc
agcaaagccagcagcaagatcaagctcacatcgtcctcgctgagcctgaacaccacgagc
tcgtcccagctctcgtccagcctgggctccgacagcctccccccggcaccctgcacccgc
agccccgagcgcggcgaggagccgctgtcctgcgactccgacctgggcaccgccaccgcc
gaggacctggacaggtccctgcaggaggtgttgtccgagttcagcaaggccaggccaagc
ccagaggccccagagggacggctgctccccagcgtgctgggctgctccccccggcctccc
ccgnggcccccggtatcgcctgcccgcccggcaccgacccatggaacacaccaggagcct
ccccccagcagtgccagctctgctcggacaggagaccccgcgccccccaggcaggggaat
ggagatgccagcggcacgtccagaattccggcccctcagaatggtctgggcagagcagag
agcatcggcagcgagggcagccaggcagcccgcagccccacggcccagtacctgctctca
cccctgctgggctgtccgacgagctggatctcagaagatgatttctacagaccttcccca
ggagagggcagtgggagcacagccaacaccaacggcttcgggccagagggggacagtgag
gagccagccctggggctcatcagtgctctggacttggagaggctctcagtgccatcctca
gacactgggaagcccaaaatgtccccagaacgggagcagaagggcttcagcgtggtgcac
cgcaggcagatgggtctttccaaccctttccgggggctgctgaagctgggcagcctggag
cggcgaggagccatggggatatggaaggagttttcctgcgagctgtccccgctggagctg
cggctcttcctggaccacgaggaccgcatctgcgtggagagctactccctgctgcgctgc
gagtccctggcgctgacccactccgacggccgctttgagctggttttcctggggaaaaag
ctcttcctccgagccccttcccaggatgaggctgaggactggctggacaggatccgcgag
gcgctgcgcaagtgccggccgcagctggaggaggaggaggactgggagactctggagaat
accgaggatggaggcgaagcccagcccgtccagggcgattccagtgctctccagtacagt
gacgtgcctgggaacagcttggactggactgcagctccagaaccagagctggatgcgatc
aaagaggctgttctgtacatggatgtggacaaaacctgggtcccatttattttttccctg
tctctagaaactctgaagtgctttaaaatcaggaacaatgaaaaagttttaagcaacagt
tacggtatagagaccatccaggacatccttccagacacgagcctggggggaccctccttc
ttcaaggtgatcacctccaaggccgtgctgaagctgcaggctgagaatgcagaggaggcg
gcctcgtggagggagctggtccgagaggtgctcatgtcctacctggagagcgccgaggag
gcgctgaccctggggggcagcttggatgggcactcccaggtcgtcctgaagaacatcgtg
aaggaaaacggcttcttgttgcagtacttggtggccatccccatggagaagggcctggac
tcgcagagcttcatctgcgcaggctgctcccggcagatcggcttctccttcgccaggccc
aagctctgcgccttctccgggctctactactgcgacagctgccaccgggacgaggagacc
gtgatcccctcccgcctcatccacaactgggatctgaccaaacgaggggtgtgcaagcag
gccctgaagttcctcacacagatccgaaaccagccgctgatcgacctgaagctggtcaac
gagagcctctacgagcacgtggagaggatggggcggatcctgcgcagccgggagcagctg
aagctgctgggggattatctcatcatgtgccgcagcggcgccctgaaggagctcagcaag
cggcttgatcacaggcattacctcctggagtgtctccacaaatacagtgtggctgatctg
aggcagatcgctgacggcgtcttcgagaccttcctgcagtcgctgctgcagtttgcatcc
caccacgtctacagctgcgacctgtgcacccagcgcggcttcatctgccagatctgcaac
agcagcagcatcatcttccccttcgagttcgacactaccaccaggtgcagcgaatgcaaa
acggtcttccaccgggactgccacgcccgggccccgtcgtgcccgcgctgcgagcggcgg
cagcggtaccagcggcggctggaggccagcacagagcccagcctgtag
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