Corvus cornix (hooded crow): 120411902
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Entry
120411902 CDS
T03546
Symbol
IRF5
Name
(RefSeq) interferon regulatory factor 5 isoform X1
KO
K09446
interferon regulatory factor 5
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120411902 (IRF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
120411902 (IRF5)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
120411902 (IRF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
120411902
NCBI-ProteinID:
XP_039426951
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All DBs
Position
1A:197651..202303
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AA seq
508 aa
AA seq
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MLRWPGRALGTRGDSAPSAMDPPRRVRLKPWLVAQVSSRRFPGLRWLDPERRRFVIPWGH
ATRNPPGGPQDHDTIFKAWAQETGRFRAGDPPDPPRWKATLRCALNKSREFRLLLDGPRG
SPAQPFRVYELCEEPPGGAEGGDEDDYGCSGEEDVSQLQKMTSLSIDDTQHRGDLLPPYP
WSKEEAPTFASCCPSGRPFGPPPPALLQGEVGGTHGAPELLPSALAETGPPLGPPGPSSS
CPVAPTEHLIPDLLVSPHMLPLTDLELKFQYRGRQVCALTVSNPHGCRLFHSSLEPTREQ
EELFGPLTLEQVPFPAPDTIPNEKQRFYTHQLLDVLDRGLILELQGQDLFALRLCQCKVF
WTGPCASPQPGPNPIQRERRTKLFSLEGFLNGLIQFQKGQTPTPPPFEIFLCFGEEWPDQ
KPKEKKLITVQVVPVAARLLLEMFSGELSWSADSIPLQISHPDLKDRMVEQFKELHQLWQ
SHQRLPPAQPPPGPSAGAWALPPGPLPH
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggtggccgggaagagccttggggacacgcggggacagtgccccgtccgccatg
gaccccccccggcgggtgcgcctcaagccctggctggtggcccaggtgagcagccggcgc
ttcccggggctccgctggctcgaccccgagcgccgacgcttcgtcatcccctggggacac
gccaccaggaaccccccggggggaccccaggaccacgacaccatcttcaaggcgtgggcg
caggagacgggccggttccgggccggggacccgccggacccgccgcgctggaaagccacg
ctgcgctgcgccctcaacaagagccgcgagttccggctgctgctggacgggccccgcggc
tccccggcccagcccttccgcgtgtacgagctctgcgaggagccccccgggggcgcagag
gggggggatgaggatgactatggctgcagcggggaggaagacgtcagccagctccagaag
atgacatccctgagcatcgatgacacgcagcacaggggggacctgctgcccccctacccc
tggtccaaggaggaggcccccacctttgccagctgctgcccctcgggaaggccctttggg
cctccccccccagcgctgctgcagggggaggtggggggcacccatggggcccctgagctg
ctccccagtgccctcgctgagacggggccccccctgggccccccggggccctcgtcctcc
tgcccggtggcaccgacagagcacctgatccctgacctgcttgtcagcccccacatgctg
ccactgactgacctggagctgaagttccagtaccggggccgccaggtctgcgccctcacc
gtgagcaacccccacggctgccggctgttccacagcagcctggagcccacgcgcgagcag
gaggagctcttcgggcccctgacgctggagcaggtgcccttccctgctcccgacaccatt
cccaacgagaagcagcgcttctacacccaccagctgctggacgtgctggaccgagggctc
atcctggagctccagggccaggatctcttcgccctccggctctgccagtgcaaggtcttc
tggacggggccctgtgcttctccccagcccggccctaaccccattcagagggagaggagg
accaagctcttcagcctcgagggcttcctcaacggcctcatccagttccagaaggggcag
acccccaccccgcccccctttgagatcttcctctgctttggtgaggagtggccggaccag
aagcccaaggagaagaagctgatcacggtgcaggtggtgccggtggcggcgcggctgctg
ctggagatgttctccggggagctgtcctggtcggccgacagcatcccgctgcagatctcc
caccccgacctcaaggacaggatggtggagcagttcaaggagctgcaccagctctggcag
agccaccagcggctgccgccagcgcagcccccgcccggcccctccgcgggtgcctgggcg
ctgccccccggccccctgccccactga
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