Corvus cornix (hooded crow): 120412065
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Entry
120412065 CDS
T03546
Name
(RefSeq) antigen peptide transporter 1-like
KO
K05653
ATP-binding cassette, subfamily B (MDR/TAP), member 2 [EC:
7.4.2.14
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw02010
ABC transporters
ccw04145
Phagosome
ccw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120412065
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120412065
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120412065
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccw02000
]
120412065
Enzymes [BR:
ccw01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
120412065
Transporters [BR:
ccw02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
120412065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
120412065
NCBI-ProteinID:
XP_039428325
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MLSPPTRRLLALLGPERGRWMLVGGLMSASALGEVAAPYFTGRVTDQVTQEDAMAVVWPL
VLVGLGSAITELVCDSMAAVALTRARDRLQRGAVAAVLRGDLPGPGGSLGDTPGAVAERV
TGDAKAAHSALGDALVPGLWSLTRAVSLLATVAWLSPVLGLLTLLALPLFLLLPRIVGRI
EQDLARQVRAAQASTTAVALESLRAIKTVRAFGHEAGVTARVRQRLAQEHQLEQMEALAY
AAGRWASGFPALALKLALLLLGGYLVAAGTVTRGELVTVLMCQLYFTTAVEGVLLYLPTL
AKAVGSSETLLELLEQARMVAPTGPSSLVTPRAQETTQTQGLCLKDVWMTYPRQSEPVLK
GWSLSLRPGEVVAVLAPPGGGKSSLAAAALGLRPLAGGTVLLDGTPLTPRADPALRQQVA
GVLQCPSLLSRSLSANITLGWGHKEWTQVMAAAQRVGVHTWATQLPHGYDTEVGPRGMQL
SGGQAQGVALARALLRTPRVLVLDEPTRALDPVTRHQVEQELLCPGGPGTGEGPAVLLVT
GRLALAQRAPRVALLEGGRLRELGTPGELRTLPWGTAGDTGDGEGDDQG
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctccccccacacgccggctcctggccctgctgggccccgagcgcggacgctgg
atgctggtgggggggctgatgtcggcctcggcgctcggtgaggtggctgccccgtacttc
acgggccgtgtcaccgaccaggtgacacaggaggacgcaatggcagtcgtgtggcccctg
gtgctggtggggctcggcagtgccatcaccgagctggtctgtgacagcatggcagctgtg
gcgctgacgcgggcgcgggaccggctccagcgcggtgcagtggccgcggtgctgcgtggg
gacttgcccggtccggggggcagcctgggggacacgccaggcgcggtggccgagcgggtg
acaggggacgccaaggcggcgcactcggcgctgggtgacgcgctggtgccggggctgtgg
tcgctgacacgggctgtgtcactgctggccacagtggcctggctgtccccggtgctgggc
ctgctcaccctcctggcactgcccctcttcctgctgctgccacgcatcgttgggcgcatc
gaacaggacctggcacggcaggtgcgggcagcacaagccagcaccactgcagtggccctg
gagtcactgagggccataaagactgtccgggcctttgggcacgaggccggtgtcaccgcg
cgcgtccggcagcgcctcgcccaggaacaccagttggagcagatggaggcgctggcctat
gcagctgggcgctgggccagtggattccctgcactggccctgaagctggcgctgctcctc
ttggggggatacttggtggccgcagggactgtcacccgtggggagctggttactgtcctc
atgtgccagctgtacttcacgacggctgtggagggcgtgctcctgtatcttccgactctg
gccaaggccgttggctcctctgagacactcctggagctgctggagcaggccaggatggtg
gcacccacagggccatcatcacttgtcaccccccgggcccaggagaccacacagactcaa
ggcctgtgcctcaaggatgtctggatgacgtaccccaggcagtccgagccagtcctcaag
gggtggtcgctgtcgctgcgccccggggaggtcgtggccgtgctggcgccccctggcggc
gggaagagctccctggcggcggcggcgctggggctgcgccccctggcgggcgggacggtg
ctgctggacgggacccccctgaccccccgcgcagaccccgctctgcggcaacaggtggcc
ggtgtcctgcagtgcccgtccctcctgtctcgctccctcagcgccaacatcacgctgggc
tggggacacaaggagtggacacaggtgatggcagcagcacagcgggtgggagtgcacact
tgggccacacagctgcctcatggctacgacacagaggtgggcccgcgggggatgcagctt
tcaggggggcaggcgcaaggggtggcactggcccgggccctgctcaggaccccccgagtg
ctggtgctggatgagcccacgcgggcacttgaccctgtgacccggcaccaggtggagcag
gagctgctgtgtcccggcggtcccgggacaggggaggggccggcagtgctgctggtgaca
gggcggctggccctggcccaacgggcgccgagggtggccctgctggaggggggccggctg
cgggagctggggacccccggggagctaaggaccctcccgtgggggacagcgggggacacc
ggggatggggagggggacgaccagggctag
DBGET
integrated database retrieval system
