Corvus cornix (hooded crow): 120412188
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Entry
120412188 CDS
T03546
Name
(RefSeq) U8 snoRNA-decapping enzyme-like isoform X1
KO
K16855
U8 snoRNA-decapping enzyme [EC:
3.6.1.62
3.6.1.64
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw00230
Purine metabolism
ccw01100
Metabolic pathways
ccw01232
Nucleotide metabolism
ccw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
120412188
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120412188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccw03019
]
120412188
Enzymes [BR:
ccw01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
120412188
3.6.1.64 inosine diphosphate phosphatase
120412188
Messenger RNA biogenesis [BR:
ccw03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
120412188
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nudt16-like
NUDIX
DEC-1_N
Motif
Other DBs
NCBI-GeneID:
120412188
NCBI-ProteinID:
XP_039428454
LinkDB
All DBs
Position
Unknown
AA seq
229 aa
AA seq
DB search
MREGGEEQAPLLSRAEALGLGRDRSGAGAAVPGPGTGWRHACHVLLHAPLPAGAPPPGHA
VLMQLRFDGRFGFPGGLAEPGEPLEAALERELREELGPAAAALRLRPRHHRGARAWPRGG
AGSDGGLVTHLYVRRLRLDELEALERGGARAPEHGLEVQGLVRVPLGVGLPAFLQNRFAG
DAREQLLGALPALGVQPPPAWDPAGAPPEPGEPLTPTPAAGEEGNEPVE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgcgggagggcggggaggagcaggcgccgctgctgagccgggcagaggcgctgggcctg
ggccgggacaggagcggggctggggcagcggtaccggggccgggaacgggctggcgccac
gcctgccatgtgctactgcacgcgccgctgcccgccggggcaccgccgccgggacatgcc
gtgctgatgcagctgcggttcgacgggcggttcgggttcccgggggggctggcggagccc
ggggagccgcttgaggcggcgctggagcgggagctgcgggaggagctgggcccggcggcg
gccgcgctgcggctgcggccgcggcaccaccgcggggcgcgcgcatggccgcggggcggg
gccggaagtgacggaggactcgtgacgcacctgtacgtgcggcggctgcgattggacgag
ctggaggcgctcgagaggggcggggccagagcgcccgagcacgggctggaggtgcagggc
ctggtgcgggtccccctcggggtggggctcccggcgttcctgcagaaccgattcgccggc
gatgctcgggagcagctcctgggggccctcccagccctcggtgtccagccccccccagcc
tgggaccccgcgggggcccccccagagccaggggagcccctcaccccaacaccggcggca
ggtgaggaggggaatgagccagtggagtaa
DBGET
integrated database retrieval system
