KEGG   Corvus cornix (hooded crow): 120412318
Entry
120412318         CDS       T03546                                 
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor p65-like
  KO
K04735  transcription factor p65
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw04010  MAPK signaling pathway
ccw04137  Mitophagy - animal
ccw04210  Apoptosis
ccw04218  Cellular senescence
ccw04620  Toll-like receptor signaling pathway
ccw04621  NOD-like receptor signaling pathway
ccw04622  RIG-I-like receptor signaling pathway
ccw04623  Cytosolic DNA-sensing pathway
ccw04625  C-type lectin receptor signaling pathway
ccw04920  Adipocytokine signaling pathway
ccw05132  Salmonella infection
ccw05164  Influenza A
ccw05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    120412318
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    120412318
  09143 Cell growth and death
   04210 Apoptosis
    120412318
   04218 Cellular senescence
    120412318
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    120412318
   04621 NOD-like receptor signaling pathway
    120412318
   04622 RIG-I-like receptor signaling pathway
    120412318
   04623 Cytosolic DNA-sensing pathway
    120412318
   04625 C-type lectin receptor signaling pathway
    120412318
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    120412318
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    120412318
   05168 Herpes simplex virus 1 infection
    120412318
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    120412318
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ccw03000]
    120412318
Transcription factors [BR:ccw03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) Rel/Ankyrin
    120412318
SSDB
Motif
Pfam: RHD_DNA_bind RHD_dimer
Other DBs
NCBI-GeneID: 120412318
NCBI-ProteinID: XP_039428642
LinkDB
Position
Unknown
AA seq 430 aa
MRFRYKCEGRSAGSIPGEHSTETTKTHPTIRVKQLPGPGRVRVSLVTKDPPHRPHPHELV
GKDCKDGFYEAELXPERSIHSFQNLGIQCVKKRELEAAVAERIRTNNNPFNVPAEQRGGE
YDLAAVRLCFQVWVXGPGGLRPLPPVLSQPVYDNRAPSTAELRICRVNRNSGSCRGGDEI
FLLCDKVQKEDIEVRFSAEGWEAKGSFAQADVHRQVAIVFRTPPFRDPALRAPVTVRMEL
QRPSDRQRSAPVDFRYLPHQGDLQCIEEKRKRTRETFRSFVQRSPLPAPASSESRPPGAS
RCPRGPPGPPEPPQCGPLLLFWGAGGLLGGPAPPEPEPLAEALLQLQFEEGSPQIGGGGG
GTGGVSTAPPLDFGALLVEPPFPPLDTINAAEVQRLLDPPSPPELRGAPLGFRGFVRSWG
GPPDLGAPPC
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgaggttccggtacaagtgcgaggggcgctcggccgggagcatccccggggagcacagc
accgagaccaccaagacccaccccaccatccgcgtgaaacaactaccggggcccgggcgg
gtccgggtgtcgctggtgaccaaggaccccccccaccgcccccacccccacgagctggtg
ggcaaggactgcaaggacggcttctacgaggccgagctgntccccgagcgcagcatccac
agtttccagaatttggggattcagtgcgtgaagaagcgggagctggaggcggctgtggcc
gagcggatccgcaccaataacaaccccttcaacgtgccggcggagcagcgcgggggcgag
tacgacctggccgcggtcaggctctgcttccaggtgtgggtgngggggcccggggggctg
cggcccctcccccccgtcctgtcccagcccgtctacgacaaccgtgcccccagcacggcg
gagctgcggatctgccgcgtcaaccgcaactccgggagctgccggggcggggacgagatc
ttcctgctgtgtgacaaggtccagaaagaggacatcgaggtccggttctcggccgagggc
tgggaggccaagggctcgttcgcgcaggccgacgttcaccgccaggtcgccatcgtgttc
cggacgccgccgttccgggaccccgcgctccgggcgccggtcaccgtccgcatggagctg
cagcggccctcggaccggcagcgcagcgcgcccgtggacttccgatacctgccccaccag
ggggacctgcagtgcatcgaggagaagcgcaagcggacgcgggagaccttccgctccttc
gtccagcgcagccccctgcccgctccggcatccagcgagtcgcggccccccggcgcatcg
cggtgccctcgcggcccccccggccccccagaacccccccagtgtggccccctccttctc
ttttggggggccggggggctcttggggggcccggccccccccgaaccggagcctttggcc
gaggcgctgctgcagctgcaatttgaggaggggtccccccaaatcgggggcggcgggggc
ggcacggggggggtcagcacggcccccccgctggattttggggcgctcttggttgagccc
ccgttccccccgctggacaccatcaacgccgccgaggtccagcgcctgctggaccccccg
agcccccccgagcttcggggagcccccctcggatttcgggggtttgttcggagctggggg
ggccccccggatttgggggcccccccatgctga

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