Corallococcus coralloides: COCOR_07017
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Entry
COCOR_07017 CDS
T01780
Symbol
nth1a
Name
(GenBank) base excision DNA repair protein
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ccx
Corallococcus coralloides
Pathway
ccx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
COCOR_07017 (nth1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccx03400
]
COCOR_07017 (nth1a)
Enzymes [BR:
ccx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
COCOR_07017 (nth1a)
DNA repair and recombination proteins [BR:
ccx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
COCOR_07017 (nth1a)
Prokaryotic type
COCOR_07017 (nth1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
EndIII_4Fe-2S
HHH
Motif
Other DBs
NCBI-ProteinID:
AFE09646
UniProt:
H8MFT7
LinkDB
All DBs
Position
8822301..8823065
Genome browser
AA seq
254 aa
AA seq
DB search
MAVKKQSRSTTTTGPRRAPRSQSARTVHAAPSDTDKLPFDTEEVLRRVRHEVRSFADAAM
FELAAKGHGSLFEQLIACILSIRTLDEVSLPASLRLLGRAHTPEALARLTPAEIDALIRP
VTFHEGKAHQVHAIAVRTRDEFNGQLPADPDVLQSFKGVGPKCAHLALGIACGHEVISVD
IHVHRVTNRWGYVKASTPERTLAALEAVLPRPYWVELNRLLVPFGKHVCTGTRPKCSTCP
VLPYCRQEGVTSHR
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcaagaagcagtcccggtccacgacgacgacaggtccacggcgggcgccgcgc
tcccagagcgcccgcaccgtgcacgcggctccgtcagacacggacaagctccccttcgac
accgaagaggtcctccgccgcgtgcgccacgaggtccgctccttcgcggatgccgccatg
ttcgagctcgccgccaaaggccatggctccctcttcgaacagctcatcgcgtgcatcctc
tccatccgcacgctcgatgaagtcagcctccccgcgtccctccggctcctcggccgagcg
cacacgcccgaagccctcgcgcgcctcacccccgcggagatcgacgccctcatccgcccc
gtcaccttccacgaaggcaaggcccaccaggtccacgccatcgccgtgcgcacgcgtgac
gagttcaacggtcagctccccgcggatccggacgtgctccagtcgttcaagggcgtgggc
cccaagtgcgcgcacctggcgctcggcatcgcctgcggccacgaggtcatcagcgtggac
atccatgtccaccgcgtcaccaatcgctggggctacgtgaaggcctccactccggagcgc
accctcgccgcgctcgaagccgtgctcccccgtccctactgggtggagctcaaccggctc
ctcgtccccttcggcaagcacgtgtgcaccggcacccgcccgaagtgctccacctgcccc
gtgctcccctactgccggcaggagggcgtcacctcccaccgctga
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