Sinomonas cyclohexanicum: SCMU_25620
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Entry
SCMU_25620 CDS
T07918
Symbol
kgd
Name
(GenBank) alpha-ketoglutarate decarboxylase
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
ccyc
Sinomonas cyclohexanicum
Pathway
ccyc00020
Citrate cycle (TCA cycle)
ccyc00630
Glyoxylate and dicarboxylate metabolism
ccyc00785
Lipoic acid metabolism
ccyc01100
Metabolic pathways
ccyc01110
Biosynthesis of secondary metabolites
ccyc01120
Microbial metabolism in diverse environments
ccyc01200
Carbon metabolism
ccyc01210
2-Oxocarboxylic acid metabolism
Module
ccyc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ccyc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ccyc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SCMU_25620 (kgd)
00630 Glyoxylate and dicarboxylate metabolism
SCMU_25620 (kgd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SCMU_25620 (kgd)
Enzymes [BR:
ccyc01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
SCMU_25620 (kgd)
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
SCMU_25620 (kgd)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
SCMU_25620 (kgd)
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
SCMU_25620 (kgd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
2-oxoacid_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
BCT76720
UniProt:
A0ABN6FK94
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All DBs
Position
2677203..2681030
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AA seq
1275 aa
AA seq
DB search
MPELPTHRLPEEFGGNEWLVDELYEQYQQNKNSVDAKWWPLFESFDSDSGHTSNGTAKGP
AVDTLTRQIPRVQAPAAQAPAAPAAAPAPAPVAAPVPAAAPAPAAPAPSPAPAASAPKKG
AAGVVRDGAKPSTTGLIPAQLPKTAKDETTEEDVVSTLRGPAKAIATNMVQSLSVPTATT
VRAVPAKLLMDQRVVINNHLTRVRGGKVSFTHLIGFAVIRALKLMPSMNVSYDEVDGKPV
AIQHAHVNFGIAIDLPRPDGTRLLVVPNIKKAETLNFSDFWHTYEDLVKRARDGKLTADD
YAGTTVSLTNPGGIGTVHSVPRLSKGQAAIIGVGALEYPAEFQGASEKILALQAVGKIIT
LTSTYDHRVIQGAGSGEFLRIVHQLLLGEQGFYDEIFESLRIPYEPVRWSPDLQVNPEDA
INKVARIQQLIHAFRVRGHLMADTNPLEYVQRRHPDLDVLTYGLTLWDLDREWPTGGFGG
KPKMKFRDILGVLRDAYCRTTGIEYMHLQEPAERKWFQDELEHPYKKPSREEQLRIVSRL
NAAEAFETFLQTKFVGQKRFSLEGGESLIPLLDATLSEAAEDGLDEVGIGMAHRGRLNVL
TNIAGKTYAQVFREFEGTQDPKSVQGSGDVKYHLGTEGTFTAENGKQTKVYLAANPSHLE
AVDSVLEGIVRAKQDRLDQGEAFPVLPILVHGDAAFAGQGVVAETLNLSQLRGYRTGGTI
HIVVNNQVGFTTSPSASRSSVYSTDVAKMVQAPIFHVNGDDPEAVVRVAQMAYRFRQRFH
KDVVVDLVCYRRRGHNEGDDPSMTQPMMYNLIEAKRSVRKLYTESLIGRGDITQDEAEQL
LRDYQERLERVFAETHAAQTSPIPIITADAKAVSDLERPLAQQRDDAAGIQRPSAISAEL
LARIGKAHIDVPEGFTVHPKLKQLLERRETMSREGGIDWGFGEIAALGSLISEGVPVRLA
GQDSRRGTFVQRHAVFHDRQNGNEWTPLANLAEGEGKLSIYDSSLSEYAALGFEYGYSVE
RPDALVAWEAQFGDFVNGAQTVIDEFISSAEQKWGQRSSLVMLLPHGYEGQGPDHSSARI
ERFLQLCAEDNMIVAQPSTPASHFHLLRRQAYNRPRKPLIVFTPKQLLRLKAAASAVTDF
TSGAFRPVIGEHEQLDANAVTRVVLVSGRLYYDLLSARTKDKDTTTAIVRVEQLYPLPEA
EIKAELAKYPNAEVVWAQDEPANQGPWPYMAVSLAPTLDKRLQLVSRAASAATSAGSMKR
HTAEENVLVHEVFDH
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
gtgccagaactgccaacgcaccgcctgcccgaggaattcggcggcaacgagtggcttgtg
gacgagctctacgagcagtaccagcagaacaagaactcagtcgacgccaagtggtggccg
ctgttcgagtccttcgactcggacagcggccacacgtccaacggcacggcgaaggggccg
gccgtcgacacgctgacgcggcagatcccccgggtccaggccccggcagcccaggcgccg
gccgctcccgcggccgcccccgctccggctcccgtggccgctccggttcccgctgctgct
ccggcacccgccgcccctgctcccagcccggcacccgccgcatcggcccccaagaagggg
gcggccggcgtcgtgcgcgacggcgcgaagccgtccacgaccggcctcatcccggcgcag
ctgcccaagaccgccaaggacgagacgacggaggaagacgtcgtctcgacgctgcgcgga
ccggccaaggcgatcgccaccaatatggtccagagcctgtcggtcccgacggccaccacg
gtgcgcgccgtgcccgcgaagctgctcatggaccagcgcgtcgtgatcaacaaccacctc
acccgtgtgcgcggcggcaaggtctccttcacgcacctcatcgggttcgccgtgatccgg
gcgctcaagctcatgccgtcgatgaacgtctcctacgacgaggtggacggcaagcccgtc
gcgatccagcacgcgcacgtcaacttcggcatcgcgatcgacctgcccaggccggacggc
acccgcctgctcgtggtaccgaacatcaagaaggccgagacgctgaacttctcggacttc
tggcacacgtacgaggacctggtcaagcgcgcccgcgacggcaagctcaccgcggatgac
tacgcaggcaccaccgtgtcgctgaccaatccgggcggcatcggcaccgtgcactcggtc
ccccgcctctccaagggccaggccgcgatcatcggcgtgggcgccctcgagtaccccgcg
gagttccagggcgcgtccgagaagatcctcgccctccaggccgtcggcaagatcatcacg
ctcacctcgacctacgaccaccgcgtcatccagggcgccggctcgggcgagttcctgcgg
atcgtccaccagctgctcctgggcgagcagggcttctacgacgagatcttcgagtccctg
cgcatcccctacgagccggtgcgctggagcccggacctccaggtcaaccctgaggacgcc
atcaacaaggtggcccggatccagcagctcatccacgcgttccgtgtgcgcgggcacctc
atggccgacacgaacccgctcgagtacgtccagcgccgtcaccctgacctcgatgtgctc
acctacggcctcaccctctgggacctcgaccgcgagtggcccacgggcgggttcggcggc
aagccgaagatgaagttccgcgacatcctcggcgtgctccgcgacgcgtactgccgcacg
accggcatcgagtacatgcacctccaggagcccgccgagcgcaagtggttccaggacgag
ctcgagcacccgtacaagaagccgagccgcgaagagcagctgcgtatcgtgtcccggctc
aacgcggccgaggcgttcgagacgttcctgcagaccaagttcgtgggccagaagcgcttc
tccctcgagggcggcgagtccctcatcccgctcctcgacgcgacgctgtccgaggccgcc
gaggatgggctcgacgaggtcggcatcggcatggcccaccgcggccgcctcaacgtcctg
acgaacatcgccggaaagacgtacgcgcaggtgttccgcgagttcgagggcacccaggat
cccaagagcgtgcagggctccggcgacgtcaagtaccacctcggcaccgagggcaccttc
accgcggagaacggcaagcagaccaaggtctacctcgccgcgaacccgtcgcacctcgag
gcggtggactcggtcctcgagggtatcgtccgcgccaagcaggaccggctcgaccagggc
gaggccttcccggtgctgccgatcctcgtgcacggcgacgccgccttcgcgggccagggc
gtcgtggcggagacgctcaacctctcccagctgcgcggctaccgcacgggcggcacgatc
cacatcgtggtgaacaaccaggtgggcttcacgacgtcgccgtcggcctcccgctcgtcg
gtgtactcgacggacgtggccaagatggtccaggcgccgatcttccacgtcaacggggac
gaccccgaggccgtggtccgcgttgcccagatggcgtaccggttccgccagcggttccac
aaggacgtcgtcgtcgacctcgtctgctaccgccggcgcggccacaacgagggcgacgac
ccgtcgatgacccagccgatgatgtacaacctcatcgaggcgaagcgctcggtccgcaag
ctctacaccgagagcctgatcggccgcggcgacatcacccaggacgaggcggagcagctg
ctgcgcgactaccaggagcgcctcgagcgcgtcttcgccgagacccacgcggcgcagacc
tcgccgatcccgatcatcacggcggatgcgaaggcggtgtcggacctcgagcgcccgctc
gcgcagcagcgcgacgacgcggcggggatccagcggcccagcgcgatcagcgccgagctg
ctcgcccgcatcggcaaggcccacatcgacgtccccgagggcttcacggtccacccgaag
ctcaagcagctccttgagcgccgcgagaccatgtcccgcgagggcggcatcgactggggc
ttcggcgagatcgctgcgctcggctcgctcatctccgagggcgtcccggtgcgccttgca
ggccaggactctcgccgaggtacgttcgtgcagcgccacgcggtgttccatgaccggcag
aacggcaacgagtggacgccgctcgcgaacctcgccgagggcgaggggaagctgtcgatc
tacgactcctcgctctccgagtacgccgcgctcggcttcgagtacggctactccgtcgag
cggccggacgcccttgtggcgtgggaggcccagttcggcgacttcgtcaacggcgcgcag
accgtcatcgacgagttcatctcctccgccgagcagaagtggggccagcgcagctcgctc
gtcatgctcctgccgcacggctacgagggccagggcccggaccactcctccgcccgcatc
gagcggttcctgcagctgtgcgccgaggacaacatgatcgtggcccagccgagcacgccc
gcatcgcacttccacctgctccggcgtcaggcgtacaaccgcccgcgcaagccgctcatc
gtcttcaccccgaagcagctgctgcgcctcaaggcggcggcctccgccgtcacggacttc
acctcgggcgccttccgcccggtgatcggcgagcacgagcagctcgatgccaatgcggtc
acccgcgtggtcctcgtctccggacgcctgtactacgacctgctgtccgcgcgcaccaag
gacaaggacacgacgaccgcgattgtgcgcgtcgagcagctgtacccgctgcccgaggcc
gagatcaaggccgagctcgccaagtacccgaacgccgaggtggtctgggcacaggacgag
cccgccaaccagggcccgtggccgtacatggcggtctcgctcgccccgacgctcgacaag
cgcctgcagctcgtctcgcgggcggcctcggccgccacgagcgccgggtcgatgaagcgc
cacacggcggaggagaacgtcctcgtccacgaggtgttcgaccactag
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