Sinomonas cyclohexanicum: SCMU_33170
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Entry
SCMU_33170 CDS
T07918
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ccyc
Sinomonas cyclohexanicum
Pathway
ccyc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SCMU_33170 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccyc03400
]
SCMU_33170 (nth)
Enzymes [BR:
ccyc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SCMU_33170 (nth)
DNA repair and recombination proteins [BR:
ccyc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SCMU_33170 (nth)
Prokaryotic type
SCMU_33170 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
BCT77475
LinkDB
All DBs
Position
complement(3475775..3476593)
Genome browser
AA seq
272 aa
AA seq
DB search
MSPDESPLALKRRARKINRALAEAYPYAHAELDFRNPFELLVATVLSAQTTDVRVNQVTP
VLFARYPDARALSEADPADVEAIIRPTGFFRAKTRSLHTLARKIVDEFDGEVPGTLTELV
TLPGVGRKTANVVLGNAFGVPGITVDTHFGRLARRFGWTASEDPLVVERDVMELFEPRDW
TMLSHRVVFHGRRVCLARRPACGACTVASLCPSYGVGETDPAKARKLLRFELAPGSEALH
AEMMANASLAASIRRRTEAQGSGEPLATGAGT
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgagccccgatgagtcgccactcgcgctcaagcgccgtgcccgcaagatcaatcgcgcc
ctcgcggaggcctatccctacgcccacgctgagctcgatttcaggaacccgttcgagctc
ctcgtcgccaccgtcttgagcgcccagaccaccgatgtccgcgtcaaccaggtgaccccc
gtcctgttcgcccgatacccggacgcacgggcactctcggaggcggaccccgccgacgtc
gaggcgatcatccgccccactggcttcttccgcgccaagacgaggagcctgcacaccctc
gcccggaagatcgtcgatgagttcgacggcgaggttccgggaaccctcaccgagctcgtc
acgcttcccggtgtagggcggaagacggcgaacgtggtgctcggcaacgccttcggtgtc
ccgggcatcaccgtggacacccatttcggccggctcgcgcggcgcttcgggtggacggcc
tcggaagacccactcgtcgtggagcgcgacgtcatggagctgttcgagccgcgggactgg
accatgctctcgcaccgggtcgtgttccacgggcgccgggtctgcctcgcgcgcaggcct
gcgtgcggcgcctgcaccgtcgcgtccctctgcccgtcctacggagtgggggagaccgat
ccggccaaggcccgcaagctcctgcgcttcgagttggctcccgggagcgaagcactgcac
gccgagatgatggccaacgcctcgcttgccgcctccatccgccggcggacagaagcccag
ggcagcggagagcctctcgccacgggtgctgggacgtga
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