Chthonomonas calidirosea: CCALI_01357
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Entry
CCALI_01357 CDS
T02699
Name
(GenBank) RND family efflux transporter, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ccz
Chthonomonas calidirosea
Pathway
ccz01501
beta-Lactam resistance
ccz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ccz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CCALI_01357
01503 Cationic antimicrobial peptide (CAMP) resistance
CCALI_01357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccz03036
]
CCALI_01357
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccz02000
]
CCALI_01357
01504 Antimicrobial resistance genes [BR:
ccz01504
]
CCALI_01357
Chromosome and associated proteins [BR:
ccz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
CCALI_01357
Transporters [BR:
ccz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CCALI_01357
Antimicrobial resistance genes [BR:
ccz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CCALI_01357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
FliJ
MIX
Nup188_N
Motif
Other DBs
NCBI-ProteinID:
CCW35175
UniProt:
S0EUX0
LinkDB
All DBs
Position
complement(1604724..1606412)
Genome browser
AA seq
562 aa
AA seq
DB search
MKPSSENASPKSAHDDGGRFPIIAPIIVVLIIGVLLVVGALPRLHQRAVLAQEAQQTRET
VPLVMVATPHLVPEGGLQLPANIEPILETVINARTQGYLSKLYVDIGSHVKAGQVLAEIE
APDTDLQVTQAEAQQSQAMATVGQSLADLARLKANLQQAQTAVVQQQAVVKEAEASLAST
KAKLMQAKAGEAQSEAALSQAQETLKEKQAALESAEAQLALARATNNRYQQLLQKGFVSQ
QEADQTAATLKTNEAAVTSAKADIQVAQKGVEAAQHAVDSSKAAVEAAQADVEAAQQSVQ
AAKATLQSLEVAVQGARADLLAGESAVQANKDALTASQANTNRYRVLRGFEKVVAPFDGV
ITSRNVDVGSLITPGTTTATLSANSSPMPTTGMFGIARTDVVRVQVNVPQAYIDAVRPGS
LATIQVRELPGHVFVGKVVSSSHALDTDTRTFLVEIHIPNPQGLLVPGMYAEVTIKPAKQ
VYRLQVPATALIYDSKGMRVAVLTPDSRVHFQPVQIGRDYGKEVEISSGLAPNDRILLNP
SDTLVEGMKVKAINANSSNLSQ
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgtcgtctgaaaacgcatcgcctaaatcggcgcatgatgatggagggcgtttt
cctatcatcgcgcccataattgttgtgctcattattggggtgttgctggtggtgggtgct
ttaccgcgcctgcatcagcgagccgttttggcccaagaggcgcagcagacccgggaaacc
gtacctctagttatggtagccactccccatctcgtgccagagggagggttacaactgcca
gccaatatcgagcctattcttgaaaccgtgatcaacgcgcgtacacagggctacctcagt
aagctctatgtggatatcggctctcacgtaaaggcgggacaggtgttggcagaaatcgag
gcgccggataccgacctgcaggtgacgcaagcagaggcccagcagtcgcaggccatggca
acggtgggacaatccttagccgacctcgcacgccttaaagcaaacctccagcaagcccaa
acggcagtggtacaacaacaggccgtggtgaaggaggcagaggcctcgcttgctagcaca
aaggcaaagctcatgcaggcgaaagcgggggaggctcagtcggaggccgcattgagccag
gcgcaagagaccctaaaagagaagcaggctgccctcgaatcggcagaagcgcagcttgca
ctggcgcgggcgaccaacaatcgctaccaacagcttctgcagaagggcttcgtgtcgcag
caggaggccgatcagaccgcggctaccctgaaaaccaatgaagccgcggtaacctctgca
aaagcagatatccaggtggctcaaaaaggggtggaagcagcccagcatgcggtggattcg
agtaaagccgccgttgaggccgcccaggcggatgtggaggctgctcagcagagcgtccaa
gccgccaaagccaccttgcagtcgttggaggtggccgtgcagggagctagagccgatctg
cttgccggcgaatcggccgtgcaggccaacaaggatgctctaaccgccagccaagccaac
acgaatcggtatcgagtccttcgaggtttcgagaaggtggtagcgccttttgacggcgtg
atcaccagtcgaaatgtggatgtgggatcgctcattactcctggcacaactacagccacc
ttaagtgccaactccagcccaatgcctacaaccggcatgttcggcattgcgcgcactgat
gtggtgcgcgtacaggtaaatgtacctcaagcctacattgatgccgtgcgtcctggcagt
cttgctacgattcaggttcgtgaacttcccgggcacgtgtttgtgggaaaggtggtatct
agctcccatgcgctagataccgacacacgtaccttccttgtagagatacatattcctaac
ccgcaagggcttctcgtgcctggtatgtatgcggaagtaaccattaaacctgccaagcaa
gtctatcgcttgcaggtgcctgccacggcgctcatttacgattctaaaggaatgcgggtg
gccgtacttactccagactcgcgtgttcatttccagcctgtccagatcgggcgtgactat
ggtaaggaggtggagatctcaagcggccttgcaccgaacgaccgtattctcctcaatccg
tcagatactctcgtggagggaatgaaggttaaagccattaacgcgaacagctcgaatctc
tcgcagtag
DBGET
integrated database retrieval system
