Clostridioides difficile CD196: CD196_0506
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Entry
CD196_0506 CDS
T00997
Symbol
nth
Name
(GenBank) endonuclease iii
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cdc
Clostridioides difficile CD196
Pathway
cdc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CD196_0506 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdc03400
]
CD196_0506 (nth)
Enzymes [BR:
cdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CD196_0506 (nth)
DNA repair and recombination proteins [BR:
cdc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CD196_0506 (nth)
Prokaryotic type
CD196_0506 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
HHH_5
RecR_HhH
HPD
Ago_PAZ_arc
HHH_8
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
CBA60983
UniProt:
A0A0H3N424
LinkDB
All DBs
Position
594081..594686
Genome browser
AA seq
201 aa
AA seq
DB search
MEKLYPDAKCELNYGTAFELLIATILSAQCTDVRVNKVTSELFKKYNTARDFANLSIEEI
SKEIKSCGLYKSKSQKIKDTSEQLCELYDGEVPDSLEKLIKLPGVGRKTAGVVLSNAFNH
PAIAVDTHVFRVSNRIGIVDEPNPQKTEFALMEAIPKERWSHSHHVLIFHGRRMCKARNP
ECASCPIKEDCNYYKELNETK
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaattgtacccagatgctaaatgtgagttaaattatgggacagcctttgaactt
ttaatagcaactattttatcagcacaatgtactgatgtaagagtgaataaagttacttca
gagttgtttaaaaagtacaacacagctagagactttgctaatttgagcattgaagaaatt
agtaaagagataaagagttgtggtctttacaaaagcaagtctcaaaaaataaaggataca
tctgaacagctatgtgaattatatgatggtgaagtacctgatagcttagaaaagcttata
aaattacctggtgttggaagaaaaacggcaggggttgtacttagtaacgcttttaatcat
ccagcaatagctgtagatactcatgtatttagagttagcaatagaataggaatagtggac
gagccaaatcctcaaaaaacagaatttgcacttatggaagctataccaaaagaaagatgg
tcacactcacatcatgtattaatttttcatggaagaagaatgtgtaaagctagaaatcca
gaatgtgcaagttgcccaataaaagaagattgtaattattataaagaacttaatgaaacg
aaataa
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