Clostridioides difficile CD196: CD196_2249
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Entry
CD196_2249 CDS
T00997
Name
(GenBank) putative lipoprotein
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
cdc
Clostridioides difficile CD196
Pathway
cdc01501
beta-Lactam resistance
cdc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CD196_2249
01503 Cationic antimicrobial peptide (CAMP) resistance
CD196_2249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cdc03036
]
CD196_2249
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdc02000
]
CD196_2249
01504 Antimicrobial resistance genes [BR:
cdc01504
]
CD196_2249
Chromosome and associated proteins [BR:
cdc03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
CD196_2249
Transporters [BR:
cdc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CD196_2249
Antimicrobial resistance genes [BR:
cdc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CD196_2249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
BSH_CzcB
RND-MFP_C
HH_YBHG
BSH_RND
BSH_YknX
BSH_CusB
Beta-barrel_RND_2
Biotin_lipoyl
CzcB_C
HH_EMRA
Pcf11_helical
DUF2564
Beta-barrel_RND_rel
Motif
Other DBs
NCBI-ProteinID:
CBA64312
UniProt:
A0A0H3N3Z8
LinkDB
All DBs
Position
2608905..2610152
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AA seq
415 aa
AA seq
DB search
MQYIIGGDMKRYLIVFLMCSSLFLVGCGKTKESEPEKPIAVSVQKAVGGEIENTNSFSGT
TKVKDETAVTAQTVGTVQEVYVKLGQNVRKGDELLSISSPELENSVKQSKASLDLAKASY
SSATGGSLEAQVNQAKTALDNAKIQYEESQRNYDNNKILYEQEVISLDQFKKIEFSLEQT
KQQLDSAQRAYDTATSKSIPQAKALAKKQLDQAQVSYNLAMSNLDKLTLTSPVDGTITAK
NFDSKEMITQSQPAFIISNPNILEVDLNVAESDIGKFKKDGNVDVIIEDQRILGKIDYVP
SVVDPQTSLYPVKVLVNNANNKFKAGMSAQVNLSIEKENGAVTVPKKAIFEENGKKYVYI
ATKDNIAKKHLVQTGIVTEDKIEIKSGVSDKDTVIIGGISLISDGTKIFPVEKEK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
gtgcaatatataataggaggagatatgaaaagatatttaatagttttcttaatgtgtagt
tcactgtttttagttggatgtggaaaaacaaaagaatctgaacctgagaaaccaatagca
gtttctgttcaaaaagcagtaggtggagaaattgaaaacacaaattctttctcaggaact
acaaaagttaaagatgaaacagctgttactgcacagactgttggcacagttcaagaagtg
tatgtaaaacttgggcaaaatgtaagaaaaggagatgaattattgagtataagcagtcca
gagctagaaaatagtgtaaagcaaagtaaagcctcactagatttagcaaaagcaagttat
tcaagtgccactggtggttcattagaggcacaagtaaatcaggcaaaaacagctcttgac
aatgcaaagattcaatatgaggagtctcaaagaaattatgacaataataagattctttat
gaacaggaagtcattagtttagaccaatttaaaaaaatagagttttctttagagcaaaca
aaacaacagttagattctgctcaaagagcatacgatacagcaacttcaaaaagtatacct
caagctaaagcacttgctaaaaaacagcttgaccaagctcaagtatcatataatttagca
atgagtaatttagacaaattaacattaacatctccagtagatggtacaataacagctaaa
aactttgattcaaaggaaatgataacacaatcacaaccagcttttattatttctaatcct
aatatactagaagttgatttaaatgtagcagaatcagatataggtaaatttaagaaagat
ggaaatgtagatgttataattgaagaccaaaggattttaggaaaaatagattatgtacct
tcagtagttgaccctcagacatctttatatcctgttaaagtacttgtaaataatgcaaac
aacaaatttaaggcaggtatgtctgcacaagtaaacttaagtattgaaaaagaaaatggt
gctgttacagtgcctaaaaaagcaatatttgaagaaaatggtaaaaaatatgtatacata
gcaacaaaagacaatatagcaaagaaacacttggttcaaactggaattgtaacagaggat
aaaatagaaattaaaagtggtgtaagtgataaagatacagtgattattggaggaataagt
cttatttctgacggaactaagatatttcctgtagaaaaggagaagtag
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