Colletotrichum destructivum: 87948744
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Entry
87948744 CDS
T10409
Symbol
CDEST_12244
Name
(RefSeq) Putative small GTP-binding protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
cdet Colletotrichum destructivum
Pathway
cdet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
87948744 (CDEST_12244)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdet03041
]
87948744 (CDEST_12244)
Spliceosome [BR:
cdet03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
87948744 (CDEST_12244)
Complex C
U5 SnRNP specific factors
87948744 (CDEST_12244)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
EFG_III
GTP_EFTU_D2
EFL1
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
87948744
NCBI-ProteinID:
XP_062784451
UniProt:
A0AAX4IVG9
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All DBs
Position
8:complement(join(1316584..1317146,1317553..1317640,1317708..1319851,1319908..1320041,1320096..1320115))
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AA seq
982 aa
AA seq
DB search
MDDLYDEFGNFIGEDVGSEEASERGAEGAYVYGDDASEAPGATGQELMEIDDDGPSNAII
LHEDKQYYPTAQQVYGDEVEVLVREEDEQLLTQPIIAPVEQKKFNIEEADLPPVFFERSF
MTDLMNFPDQIRNVALAGHLHHGKTAFMDMLVLETHDITDRLERRVGKKRDEQLRYTDVH
VVERERGVSIKASPMSLVLPSSKGKSHLVNILDTPGHVNFVDEVATSLRLADGVCLVVDV
VEGVQVNTEQIIKHAVLEDIPLTLIINKMDRLILELKLPPKDAYFKLKHVIEEVNTVIEN
TIPGKGEAKRISPEKGNVLFACTDMGWCFTLQSFAKMYADTYGGINTEDFAKRLWGDVYF
NPEKRNFTRKPLETRSSRSFVNFVLEPIYKVFTHTISDSPEDLKVVLSGLGITLKPSQYK
ADAKVLLKLVCEQFFGPSTGFVDMIVSHIPSPDKSAERYLEKYYTGPLDTKVAQSVKSCN
QDGPLVVHVTKLFSTADAKSFYSFGRVLSGTARPGMQVRVLGEGYSTDDDEDMAMATISD
VFIGESRYNISTDGVPAGNYVLLGGVDNSIVKTATLVPPKLEDDEDPYIFKPVTHFTESV
LKVAVEPINPSELPKMLDGLRKIQKSYPLITTKVEESGEHIVLGTGELYMDCVLHDLRRL
YADMEIKVSDPVTRFCETVVEQSATKCYAITPNKKNKITMVAEQLDKGISEDIESGKVKI
RDPIRKTASYFEETYGWDKLAARSIWAFGPDEMGPNILQDDTLPSEVDKKLLTTVKETIR
QGFSWATREGPLCEEPIRNTKFRITDVSLASEAIFRGGGQIIPTSRRACYSSFLMASPRL
MEPLYSVSVTGPEDSATEVYTTLARRRGHVLQDGPVAGTPLYRVNGLIPVIDSFGFETDL
RIKTKGMAMVSLTFDSWSIVPGDPLDKEVIIRPLQPASAQATARDFVLKTRRRKGLSEDV
SVATFLEPEFYQSLMESGALGD
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctatacgacgagtttggtaactttattggcgaggatgtcggctccgaagag
gcgtccgaaaggggagcggagggcgcctacgtttacggcgacgacgccagtgaagcaccc
ggggctactggtcaggaattgatggaaattgacgatgatggcccatcgaacgcgatcatc
ctgcacgaagacaagcagtactacccgacggcgcaacaagtatacggagatgaggtcgaa
gtactggtacgagaggaggacgaacagctactcacgcagccaattattgcgcccgttgag
caaaagaagttcaacattgaggaggccgacctgccgccagtcttcttcgagcgaagcttc
atgacagaccttatgaacttccccgaccaaattcggaacgtcgcgctggcaggacatctc
catcacggaaagacggcgtttatggacatgctggtgttagagacccacgacatcaccgac
aggctcgagcgccgggtcggcaagaagagagacgagcagctcagatacaccgacgtacac
gttgtcgaaagagaaagaggtgtgtcaatcaaggcttcgccaatgagcttggtgttgccg
agctctaagggaaaatcccacttagtcaacattttggatacccccggccacgtcaacttt
gtcgacgaggtcgcgactagcctgagattggccgacggcgtctgtttggttgttgacgtc
gtggagggcgttcaggtcaacaccgagcagattatcaagcacgcagttctggaggacata
cccttgacactcatcatcaacaagatggatcgtctcatcttggagctcaagctgccgccc
aaggatgcgtacttcaagctcaagcatgtgattgaggaggtcaacaccgtcatcgaaaac
acaattccaggaaagggtgaggcaaagcgtataagtcctgaaaagggcaacgtcctgttt
gcttgcacagacatgggatggtgcttcactctgcagtcgttcgccaaaatgtacgccgac
acctacggcggcatcaacacagaggactttgcaaagaggctgtggggagacgtctatttc
aaccccgagaagaggaactttacgcgcaagccactggaaactcgctcgagccggtcgttc
gtcaacttcgttctggaacccatctacaaggtcttcacacacaccatcagtgacagccct
gaagatttgaaagtggttctgagcggtctcggcatcactctgaaaccgtctcagtacaag
gccgatgccaaggtgctgctgaagcttgtttgcgaacagtttttcggtccctcaaccggg
ttcgtcgatatgatcgtgagccacattccctcacccgacaagtctgcggagaggtatttg
gagaaatactacacaggccctctggacacgaaggtggcccagtccgtgaaatcctgcaac
caagatgggccgttggttgttcacgttacgaagctcttcagcacagcagatgccaagagc
ttctattcgtttggtcgtgttctgagtggcacagctcgtcctggcatgcaggtccgagtc
ttaggagaaggttactcaacagacgatgacgaagacatggccatggcaacgatttccgac
gtgtttattggcgagtcaagatacaacatctccacggatggtgtaccggcaggcaactat
gtgcttcttggcggagtcgacaactccatcgtcaagacagcaacactcgttccgcccaag
ctcgaagacgatgaggacccctacatcttcaagcctgttacgcatttcacagaatccgtt
cttaaggtggctgttgagcctatcaacccttcagaactccccaagatgcttgacggtctg
cggaagatccaaaagagctacccgctgatcaccacgaaggtcgaggagtcaggagaacac
atcgtgctgggcactggcgagctgtacatggactgtgttctgcacgatttgagacgccta
tacgccgatatggagatcaaggtgtcagatcccgtcacacgattctgcgaaacagtcgtg
gaacaatcagcgacaaaatgctacgccatcacaccgaacaagaagaacaagatcacaatg
gtggccgagcagctggacaaaggcatctcagaagacatcgagtcaggcaaggtcaagatc
agggaccctatccgcaagacggccagctacttcgaagagacttacggctgggacaagttg
gcagcgagaagcatctgggcttttggtcctgatgagatgggccctaacatcttgcaggac
gacacattgccctccgaggtcgacaagaagctgctgacaacggtcaaggagaccattcgc
caaggttttagctgggctactagagaaggtcccctgtgtgaagagcccattcgaaataca
aagttcaggatcaccgatgtgtcgttggcgtcggaagccatcttccgtggtggcggtcag
attatccccacctctaggcgggcctgctattcctcgttcctgatggcctctcctcggttg
atggagccgctgtattccgtctcagtgacgggccctgaagactctgctacggaggtttac
acgacgttggccagacgtcgtggccacgtcctccaggatggcccggtggccggcacgccc
ctctaccgcgtcaacgggctgattcctgtcatcgactcatttggtttcgagacggacctg
cgcattaagaccaagggtatggccatggtcagtctgacgtttgacagctggagcattgtg
cccggtgaccctcttgacaaggaggtcatcattcggcccctgcagccagccagcgcccag
gccacagctagagattttgtgctgaagaccagaaggagaaagggtctcagcgaggacgtg
agcgtggcgaccttcttggaacccgaattctaccagagccttatggagagtggtgcgctt
ggcgactga
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