Colletotrichum destructivum: 87949918
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Entry
87949918 CDS
T10409
Symbol
CDEST_13418
Name
(RefSeq) Putative ribosomal protein eL8/Nhp2 family
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
cdet Colletotrichum destructivum
Pathway
cdet03008
Ribosome biogenesis in eukaryotes
cdet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
87949918 (CDEST_13418)
09122 Translation
03008 Ribosome biogenesis in eukaryotes
87949918 (CDEST_13418)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdet03041
]
87949918 (CDEST_13418)
03009 Ribosome biogenesis [BR:
cdet03009
]
87949918 (CDEST_13418)
Spliceosome [BR:
cdet03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
87949918 (CDEST_13418)
Ribosome biogenesis [BR:
cdet03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
87949918 (CDEST_13418)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
PELOTA_1
Motif
Other DBs
NCBI-GeneID:
87949918
NCBI-ProteinID:
XP_062785625
UniProt:
A0AAX4IYN5
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All DBs
Position
9:join(975730..975835,975894..976165)
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AA seq
125 aa
AA seq
DB search
MADQSAAWPLADDALQQEILDLVQQCQHYRQLKKGANEATKTLNRGVSELIILAADTNPL
SIVLHLPLLSEDKNVPYVYVKSKTALGRACGVSRAVIAASITSNEGSELAGPIRALRDKI
ERLAI
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcaatccgctgcctggcccttggccgacgatgctcttcagcaggagatcctg
gacttggtccagcagtgccagcactaccgccagctgaagaagggcgccaacgaagccacc
aagaccctcaaccgtggtgtctccgagctcatcatcctcgccgctgataccaaccctctc
agcatcgttcttcacctgcctctcctctctgaggacaagaacgttccctacgtctacgtc
aagtccaagaccgcccttggtcgtgcctgtggtgtctctcgcgctgtcattgctgccagc
atcacctccaacgagggcagcgagctcgctgggcccattcgcgctctccgcgacaagatc
gagagacttgctatctaa
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