Cryptococcus deuterogattii: CNBG_3970
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Entry
CNBG_3970 CDS
T09796
Name
(RefSeq) GTP-binding nuclear protein spi1
KO
K07936
GTP-binding nuclear protein Ran
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03008
Ribosome biogenesis in eukaryotes
cdeu03013
Nucleocytoplasmic transport
cdeu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CNBG_3970
03008 Ribosome biogenesis in eukaryotes
CNBG_3970
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CNBG_3970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdeu03019
]
CNBG_3970
03009 Ribosome biogenesis [BR:
cdeu03009
]
CNBG_3970
03016 Transfer RNA biogenesis [BR:
cdeu03016
]
CNBG_3970
03036 Chromosome and associated proteins [BR:
cdeu03036
]
CNBG_3970
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cdeu04147
]
CNBG_3970
04031 GTP-binding proteins [BR:
cdeu04031
]
CNBG_3970
Messenger RNA biogenesis [BR:
cdeu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
CNBG_3970
Ribosome biogenesis [BR:
cdeu03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
CNBG_3970
Pre-60S particles
CNBG_3970
Transfer RNA biogenesis [BR:
cdeu03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
CNBG_3970
Chromosome and associated proteins [BR:
cdeu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
CNBG_3970
Spindle formation proteins
CNBG_3970
Exosome [BR:
cdeu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CNBG_3970
GTP-binding proteins [BR:
cdeu04031
]
Small (monomeric) G-proteins
Ran Family
Ran
CNBG_3970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
G-alpha
GTP_EFTU
Pox_A32
AAA_24
DUF5118
AAA_7
AAA_22
AAA_33
TsaE
Motif
Other DBs
NCBI-GeneID:
88180212
NCBI-ProteinID:
XP_062883664
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All DBs
Position
6:complement(592491..593975)
Genome browser
AA seq
213 aa
AA seq
DB search
MENTATFKMVLCGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLTFHTNFGTICFNVW
DTAGQEKFGGLRDGYYIQGQCGIIMFDVTSRITYKNVPNWHRDLERVCENIPIVLCGNKV
DVKERKVKTGNVTFHRKKNLQYFEISAKSNYNFEKPFLWLARKLVGNQSLEFVAAPALAP
PEVQVDQALIAKYEEELKAAANAPLPDEDDADL
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggagaacactgctaccttcaaaatggtcctgtgcggtgacggtggtactggaaagacc
accttcgtcaagcgtcatttgaccggcgagttcgaaaagaagtacattgctactcttggt
gttgaagtccaccctcttactttccacaccaacttcggcactatttgcttcaatgtttgg
gacactgcgggtcaagaaaagttcggaggtcttcgtgatggttattacatccaagggcaa
tgcggtatcattatgtttgatgtcacttctcgtatcacttacaaaaatgttcccaactgg
caccgcgaccttgaacgagtgtgtgaaaacattcctatcgtcctctgtggcaacaaggtc
gatgtgaaggagaggaaggtcaagactggcaacgtgactttccaccgcaagaagaacctt
cagtatttcgagatctctgcaaagtctaattacaactttgagaaacctttcctttggctt
gccaggaagcttgttggcaaccaatctcttgagtttgtggctgctcccgctcttgcaccc
cctgaggttcaggttgaccaggcccttattgccaaatatgaggaggagcttaaggctgct
gccaatgcccctttgcccgatgaggatgatgccgatctttag
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