Cryptococcus deuterogattii: CNBG_4034
Help
Entry
CNBG_4034 CDS
T09796
Name
(RefSeq) uncharacterized protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
cdeu
Cryptococcus deuterogattii
Pathway
cdeu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cdeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CNBG_4034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdeu03400
]
CNBG_4034
Enzymes [BR:
cdeu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
CNBG_4034
DNA repair and recombination proteins [BR:
cdeu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
CNBG_4034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
DUF6305
Motif
Other DBs
NCBI-GeneID:
88180275
NCBI-ProteinID:
XP_062883727
LinkDB
All DBs
Position
6:744887..748442
Genome browser
AA seq
942 aa
AA seq
DB search
MSMTDILFESFAKLIYRLGNPPRSQVTNDPYSPDEIFTSWLNHLCKPFPIHTGKHLFRLL
FPHLGPRRRYGLKEQKLAQELSKILGAKTLNQWDSVRWNDIGETGTGCLGHEIEALAKNR
STSGEDGRSLLTISALDTLLDELAASSSFSQLSQLPGAPRPTNKILTILYCEWKLSPFAL
SVLTQIILRDLRPLQDPIPCLPIRNPTSLLRIKTKNSPCQLSLKDAMMCWDKRMWDLYNR
GYGNLDLCADLLEQNPLMDPSKNHGPIVGVNVAIPKCKKGRSIRDTIKEFTCSRYRGCST
AIWAETKYDGYRMQIHVDAQNPYPKITIFSKSTRDSTQDRLNTHAIICHALNLPVNPSLP
LHRLLSQRTQSTIAFCLQRKIQKSVILEAEVVPFNENSREGDRGPGREEFWWLGHAGVSA
GAMNWAFSGKSLPSVSSRHLCLVFFDILHIDGEGLLNHTYEERRRLLEDVIRVIPGFSQL
AESTKISLQGQPEHALDELEDIFKKSINLREEGLVLKAAESTYTNMRWQWVKLKKDYIPN
LGDCIDLVLLGAGWDINRARELRVDTSVFTTFYVGALTNSERVKSRCETPHFEILFRVSY
GCSRSELEAYNENIRLGRWKNKPFDKDDPFKRRLIGLSWTYSLQRGMTPPSVLFERPMCV
EVMGAGFQKLLGSELYELRWPRLQKIYDPRERQWTEALSALSLISIAHSSLGYKCLSASS
YGKNSPRFQDSIDAAWRSASHLSITDIPDFLSPSPKLQGQKRSKSEADLSGCKVKDEPLT
PRSSPLGPSATGRVEAAKRKYTEIASRRLRDVMEKEKGMTHESGTEIPPVGYLPTTTATA
AAADQIIQSKRRRLTASAGLSLSVMPFKEKVQLVELQGLASLITTAGQSPEEPLTKRLSE
ASGIAATTMRQKARNSDVQRWGKPLSLKSRIKLAMRQAGKVS
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgacggacattttgttcgaaagctttgctaagcttatctatcgccttggaaat
ccaccgaggtctcaagtgaccaacgacccctattcaccagatgaaatattcacctcatgg
ctcaaccatctgtgcaaaccctttcccattcacactgggaaacatctatttcgcctgtta
ttcccccatttgggacccagaagaagatatgggctgaaggaacaaaaacttgcccaggag
ctttccaaaattttgggcgcaaagaccttgaaccaatgggacagtgttcgctggaatgat
ataggtgaaacagggacaggctgtctaggtcatgagatagaagcactagcaaaaaatcga
tcgacatccggcgaggatggcagatcccttctaactataagtgcgctggacaccttgctt
gatgagctagctgcttcttcatcattctctcaactgtctcaacttcctggtgctcctcgg
ccaactaataaaatacttactattctatactgcgaatggaaactttcacccttcgctctt
tccgtcctcactcagattattttgcgcgatctgcggccccttcaggatccgatcccatgt
ctacccattaggaatcctacttctttgctgcggatcaagactaaaaattcgccttgccag
ttgagcttaaaggacgctatgatgtgctgggataaacgtatgtgggatctctataacagg
ggatatggcaacttggacctttgcgcggatcttctggaacaaaatccactaatggacccc
tccaaaaaccatgggcctatcgtaggggtcaatgtcgcaatcccaaaatgcaagaaaggc
agatcaattcgagataccataaaagaattcacctgctcaaggtaccggggatgttctacg
gctatctgggcagagactaagtatgacggctatcgcatgcaaattcacgtggatgcccaa
aatccatatcccaagattacgatttttagtaaatccaccagagatagcactcaagatagg
ctcaatactcatgctattatatgccatgctctcaaccttcctgtaaatccgagtcttcct
ctgcaccggttactgtcgcagagaacacagtcaactattgccttttgtcttcaacgcaag
attcaaaaatctgtcattctagaggcagaggttgtgcccttcaacgaaaactctagagaa
ggagatcgtgggccaggaagagaggagttctggtggttgggacacgcaggagtttcagca
ggagctatgaactgggcattctctggcaaaagcctcccaagcgtctcaagccgtcatttg
tgcctcgttttctttgatatattacatatcgatggtgaaggactgctcaaccatacttat
gaagagcgaaggaggttgctagaggacgtcatcagggttatcccgggctttagtcagctg
gctgaaagcaccaagatttctttgcaaggccagccggagcatgccttggatgaactggaa
gatatcttcaaaaagagcatcaatcttcgggaagagggtttggttctcaaagctgccgag
tctacttacactaatatgcgatggcaatgggtaaaattgaagaaagactacattccaaac
ctgggtgactgtattgatttggtccttctgggcgcaggctgggacattaatcgggcacga
gagttacgagtcgatacatctgtctttaccacgttctacgttggtgcgctcactaactca
gagcgcgtcaaatctcgctgcgagactcctcattttgagattctattccgtgtttcttat
ggctgtagtagaagtgaattggaggcgtacaatgagaacatacgactgggtagatggaag
aataaaccatttgacaaggacgatccatttaaacgacggttaatcggcctatcttggaca
tactcattacagaggggaatgacgccaccttctgtgctcttcgaaaggcctatgtgtgtc
gaagtcatgggtgctggattccaaaaactgcttggttcagagctttacgaattacggtgg
ccaagactccaaaaaatttatgatcctcgcgaacgacagtggacggaagctctttctgct
ctttctttgatttcgatcgcccactcttctctaggctacaagtgtttatcagcatcatcc
tatgggaaaaattctcctcgctttcaagactcgatagacgccgcttggagatcagcaagt
catctcagcattacggacatacctgattttctatcgcctagtccaaaattgcaagggcag
aagaggtcaaaatcagaggccgacctatcgggctgcaaggtgaaagatgaacctttgacg
ccacgatcgtcccccctaggaccttcagctacaggtagggtggaagctgctaaaaggaag
tatacagaaatagctagcagacgactgagagatgtgatggaaaaagaaaaaggaatgact
cacgaatcagggactgagattccaccagttgggtatctcccaacgaccacagcaacagcc
gccgcggctgaccaaataatccagtcaaagaggagaagactgaccgcatccgctggccta
tccttgtccgtgatgcctttcaaagagaaagtgcaattggttgaattacaaggtttagcc
tcccttataacgactgctggtcagtcgccggaagagccactgaccaagcgactgtcggag
gcatctggaatagctgcgacaactatgcggcagaaagcaagaaattcagatgttcaaagg
tggggaaagccattgtcattaaagtcaagaataaagctggcaatgagacaggctgggaag
gtttcttaa
DBGET
integrated database retrieval system
