Camelus dromedarius (Arabian camel): 105086114
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Entry
105086114 CDS
T04642
Symbol
SMCHD1
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1 isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
cdk
Camelus dromedarius (Arabian camel)
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cdk03036
]
105086114 (SMCHD1)
03400 DNA repair and recombination proteins [BR:
cdk03400
]
105086114 (SMCHD1)
Chromosome and associated proteins [BR:
cdk03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
105086114 (SMCHD1)
DNA repair and recombination proteins [BR:
cdk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
105086114 (SMCHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMCHD1_S5
Ig_SMCHD1_5th
Ig_SMCHD1_1st
Ig_SMCHD1_8th
Ig_SMCHD1_7th
Ig_SMCHD1_6th
Ig_SMCHD1_2nd
Ig_SMCHD1_4th
SMC_hinge
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
105086114
NCBI-ProteinID:
XP_010974827
LinkDB
All DBs
Position
24:18650197..18764838
Genome browser
AA seq
1995 aa
AA seq
DB search
MAAAGGGGPSVGTGEGGGGDGYRTVYLFDRREKESELGDRALQVGERSDYAAFRSSVCQT
LGISPEEKFVITTTSRKEITCDNFGETVKDGVTLYLLQSVNQLLQTATKERIDFLPHYDT
LVKSGMYEYYASEGQNPLPFALAELIDNSLSATSRNTGVRRIQIKLHFDETQGKPAVAVI
DNGRGMTSKQLNNWAVYRLSKFTRQGDFESDHSGYVRPLPVPRSLNSDISYFGVGGKQAV
FFVGQSARMISKPADSQDVHELVLSKEDFEKKEKNKEAIYSGYIRNRKPSDSVHITNDDE
RFLHHLISEEKEKDSFTAVVITGVQPEHILYLKNYFLLWTRQLAHIYHYYIHGPKGNEKR
TSKEVGPFNNIDIEISMFEKGKTPKIVNLREIQDDMQTLYINTAADSFEFKAHVEGDGVV
EGIIRYHPFLYDRETYPDDPCFPKLKDEDDDDDCFILEKAARGKRPIFECFWNGRLIPYT
SVEDFDWCTPPKKRGLAPIECYNRISGALFTNDKFQVSTNKLTFMDLELKLKDKNTLFTR
ILNGQEQRMKIDREFALWLKDCHEKYDKQIKFTLFKGIITRPDLPSKKQGPWATYSAIEW
DGKIYKAGQLVKTIKTLPLFYGSIVKFFLYGDHDGEVYATGGEVQIAMEPQALYDEVRTV
PIAKLDRTVAEKAVKKYVEDEMARLPDRLSVTWPEGDELLPNEIRPAGTPIGALRIEILN
KKGEAMQKLPGTSHGGSKKLLVELKVILHSSSGNKEIISHISQHGGKWPYWFKKMENIQK
LGNYTLKLQVVLNESNADTYAGRALPSKAIKFSVKEGKPEKFSFGLLDPPFRVGVPFNIP
LEFQDEFGHTSQLSTDIQPDFEASGLSVHYEEITKGPNCVIRGVTAKGPVNSCQGKNFNL
KVILPGLKEDSQILKIRLLPGPPCRLKVKPDSEILVIENGTAFPFQVEVLDESDNVTAQP
KLIVHCKFSGAPNLPIYVVDCSSTGTSILSGPPIQVQNIKKDQTLKAKIEIPSCKDVAPV
EKTIKLLPSSHVARLQIFSVEGQKAIQIKHQDEVNWIAGDIMHNLIFQMYDEGEREIHIT
SALAEKIKVNWTPEINKEHLLQGLLPDVQVPTSVKDMRYCQVSFQDDHVSLESAFTVRPL
PDEPKHLKCELKGGKTVQMGQELQGEIVVIVTDQYGNQIQAFSPSSLSALGIAGIGLDSS
HLKTTFQENTQSISVRGIKFIPGPPGNKDLCFTWREFSDFIRVQLISGPPAKLLLIDWPE
LKESIPVINGRELQNPLIVQLCDQWDNPAPVPQVKISLVKANNLKLTPSNQQHKTDERGR
ANLGVFSVYAPRGEHIMQVKAIYNKNTIEGPIIKLMILPDPEKPIRLNVKYDQDASFLAG
GSFTDFMITVISEDDSIIKNINPARISMKMWKLSNSGNRPPANAETFSCNKIKDNDKEDG
CFYFRDKAIPNKVGTYCIQFGFMMDKANILNSEQIIVDVLPNQPVKLVPEIQPATPAVSN
VRSVASRTLVKDLYLHITDAYNNRTGIDLVGTVMATIKGSNEEDDTPLFIGKVRTLEFPF
VKGSAEITSLVLAESSPGKDSTEYFIIFEPRLPALSSTLESYILPFMFYNDVKKQQQMAA
LTKEKDQLSKSIIMYRSLFDASKQLLDEMKCQVEEAKLKEAQLRNELKTHNIDIPITQQM
PHIEALLKRKISEQEELKKKPRRSCTLPNYTKGSGDVLGKIAHLAQIEDDRAAMVISWHL
ASDMDCVVTLTTDAARRIYDETQGRQQVLPLDSIYKKTLPDWKRPLPHYRNGKLYFKPIG
DPVFARDLLTFPDNVEHCETVFGMLLGDTIILDNLDAANHYRKEVVKITHCPTLLTRDGD
RIRSNGKFGGLQNKAPPMDKLRGMVFGAPIPKQCLILGEQIDLLQQYRTAVCRLGTVNED
LNGQLKYLHTPDMKKKKQELDEQEKNLKLIEQKLGMTPTRKCNDSLRHPTTDCPIPPKRM
RREATRQRIITKTDL
NT seq
5988 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcaggcggcggcgggccctcggtgggcaccggagagggcggcggaggagac
ggctacaggacggtgtacttgtttgaccggcgcgagaaggagtcggagctcggggaccgg
gcgctgcaggtcggggagcgctcggactacgcggcgttccgctcctccgtgtgtcagaca
cttggcatttcacctgaagagaaattcgttattacaacaacaagtaggaaggaaattacc
tgtgataattttggtgaaactgttaaagatggagtcactctatacctgctgcagtcagtc
aatcagttactacaaacagctacaaaagaacgaattgacttcctacctcactatgacaca
ttggttaaaagtggcatgtatgaatattatgcaagtgaaggacaaaatcctttaccattt
gctcttgcagaattaattgacaattcattgtctgctacttctcgtaacactggtgttaga
agaatacagatcaaattgcattttgatgaaacacaaggaaaacctgccgttgcagtaata
gataatggaagaggaatgacctctaaacagcttaacaactgggcagtgtataggttgtca
aaatttacaaggcaaggcgactttgaaagtgatcattcaggatatgttcgaccactgcca
gtgccacgcagtttaaatagtgatatttcctattttggtgttgggggcaagcaggcggtt
ttctttgttggacaatcagccagaatgataagcaaacctgcagattctcaagatgttcat
gaacttgtactttctaaagaagattttgagaagaaggagaaaaataaggaggcaatttat
agtggatatattagaaacagaaagccatctgattctgttcacattacaaatgatgatgaa
agatttctacatcatctaatctcagaggagaaggaaaaagatagctttactgctgtggtt
atcacaggggtacaaccagaacacatactgtacttgaaaaattatttccttctttggaca
agacagttagcgcatatttatcattactatattcatggcccaaaaggaaatgaaaaacgt
acatcaaaagaagttggaccttttaacaacattgatattgaaatttctatgtttgaaaaa
gggaagacacctaagattgtcaacctaagggaaatacaagatgacatgcagacgttgtat
ataaatacagcagctgatagttttgagttcaaggctcatgttgaaggagatggtgtagtg
gaagggatcattcgatatcaccctttcttatatgatagagaaacataccccgatgatcca
tgctttccaaaattaaaagatgaagacgatgatgatgattgtttcatacttgagaaggca
gcaagagggaaaaggcctatttttgaatgtttttggaacggacgactaataccatataca
tctgttgaagactttgactggtgtactcctcctaagaagagaggacttgcaccaattgaa
tgctacaataggatatctggtgcattattcaccaatgacaaattccaagtcagcacaaat
aaactgacctttatggatcttgagctaaaattgaaagataagaacactctttttacaagg
attttgaatggacaggagcaacgaatgaaaattgacagagaatttgctttatggctgaag
gactgtcatgaaaagtatgacaaacaaataaaatttacactttttaaaggaataattaca
cgtcctgatcttccttcaaaaaaacagggcccctgggcaacttactcagcaatagaatgg
gatgggaaaatatacaaagcaggacaactggtcaagacaatcaagacacttcctctcttt
tatggaagtattgtaaaatttttcctttatggtgatcatgatggagaagtatatgctaca
ggaggagaggttcaaattgcaatggaacctcaagcactgtatgatgaagtaagaactgtg
ccaattgcaaagctggataggacagtagctgagaaagctgtgaaaaaatatgtagaagat
gaaatggcaaggctccctgatagattgtcagtaacttggcctgaaggagatgaattattg
ccaaatgagattaggcctgctggaacccccattggtgcattgagaattgaaatactgaat
aaaaaaggagaagcaatgcaaaaacttccaggaacaagtcatggagggtcaaagaaactc
ctggttgagctcaaagttatattacactcttcaagtggaaataaagaaatcatttcacac
attagtcaacatggaggaaaatggccttactggtttaaaaaaatggaaaatattcaaaag
ttggggaattatactttgaaattacaagttgtattgaatgaaagtaatgcagacacttat
gcaggaagagcactaccatctaaagcaattaaattttctgttaaagagggcaagccagaa
aaattttcatttggtcttttggatcctcctttccgtgttggagtcccattcaacatccct
ctggaatttcaggatgaatttggtcatactagtcaactatcaactgatattcagccagat
tttgaagcaagtggtttatctgtacattatgaagaaataaccaaaggaccaaattgtgta
attcgaggtgttacagctaagggccctgtaaactcttgtcaagggaagaattttaatctg
aaggttattctgccgggtttaaaagaagactcacagattttgaaaattagattactgcca
ggtcctccttgtcgattgaaagtgaaacctgattctgaaattttagttattgaaaatgga
acagctttcccatttcaggtagaagttttggatgaatcagacaatgtaacagcacaacca
aaattgattgttcattgtaagttttcaggtgctccaaaccttccaatatacgttgtggat
tgcagtagtactggaaccagtattttatcaggaccaccaattcaagttcagaatattaaa
aaagaccagacgcttaaagcaaaaattgaaatacctagttgtaaagatgtggcacctgtg
gagaagaccattaagttgcttcccagtagccatgttgcaagattacagatattcagcgtg
gaaggacagaaggcaatccagatcaaacatcaggatgaggttaattggatagcaggcgat
attatgcataatcttatttttcaaatgtatgatgaaggagaaagagaaatccatataaca
tcagctttagcagagaagattaaagttaattggactcctgagattaacaaagaacatttg
ctacagggtctgcttcctgatgtgcaagtaccaacatctgtaaaagatatgcgctattgc
caggtttcattccaagatgatcatgtgtctttggaaagtgcatttacagtaagaccactt
cctgatgaacctaaacatctaaaatgtgaattaaaaggtggaaaaacagtacagatgggc
caagagcttcaaggagaaatagttgtaatagttacagatcagtatggaaatcagattcaa
gcattttctccaagttctttgtctgccttgggaattgctggaattggacttgatagctca
catttgaagactacttttcaggaaaatacacaaagtataagtgtaagaggcatcaaattt
attccaggtcctcctggaaataaggatctttgttttacttggcgtgagttttctgacttc
attcgagtgcagctaatttctggcccaccagctaaacttctccttatagactggccagaa
ttaaaggagtccatcccagtgattaatggaagagaattacagaatcctctcattgttcaa
ctttgtgatcagtgggataatccagcacctgtgccacaggttaaaataagtcttgtaaaa
gctaacaatttaaagctcactccttcaaaccaacagcataaaactgatgaaaggggcagg
gctaatttgggagtgttcagtgtttatgctcctagaggagaacatattatgcaggttaaa
gccatctataacaagaatactatagaaggacctataattaagttaatgattcttccagac
cctgaaaaacccattcgtctcaatgttaaatatgaccaagatgcttcctttttagcaggg
ggtagtttcaccgattttatgattactgttatttctgaagatgacagtatcattaaaaat
attaatccagcacgtatttccatgaaaatgtggaaactgtctaacagtgggaaccgacca
ccagcaaatgcagaaacatttagctgtaataaaataaaagataatgacaaggaagatggc
tgcttctacttcagggataaagcaattcctaacaaagtgggaacatattgtatccagttt
ggctttatgatggataaagcaaatattcttaatagtgaacagattatagttgatgttctg
cctaatcaacctgtgaagttagttcctgaaatacagccagctacaccagctgtttcaaat
gttcgctcggttgccagtaggaccttggtcaaagatttataccttcatatcacggatgcc
tacaacaatcgtactggaattgatttggttggcactgtaatggctaccatcaaaggttct
aatgaggaagacgacacaccactctttattgggaaagtgagaacacttgaatttcccttt
gtgaaaggttcagctgaaatcacgagtctagtactggcagaaagtagtcctggaaaggat
agcactgagtattttattatatttgagcctcggcttccagctttatcaagcacattagaa
tcatatatcctaccattcatgttttacaatgacgttaagaagcagcaacaaatggcagca
cttacaaaagaaaaggaccaattatctaagtctattataatgtatagaagtttatttgat
gccagcaaacagcttcttgatgagatgaagtgccaagttgaagaagcaaaattaaaagag
gcccagttgcgaaatgaactaaaaacacataatattgacattcctataacacaacagatg
ccacacattgaagcacttttgaagagaaagatatcagaacaagaagaactaaagaagaaa
cctagaagatcatgtactcttccaaactatactaaaggcagtggagatgttttgggaaag
attgcacacctggcacaaattgaagatgatagagccgcaatggttatttcttggcatctg
gcaagtgatatggactgtgtggtcaccctgaccactgatgctgcacgtcgtatctatgac
gaaacccaaggtcgtcagcaggtgttgccccttgattctatttataagaagactcttcca
gattggaaaagacctctacctcattaccgaaatggaaaattgtattttaagcccattgga
gatcccgtctttgctcgagatttgttaacatttccagataacgtagaacattgtgaaaca
gtgtttggtatgctgttaggagacaccattattttggataatttggatgctgccaatcat
tatagaaaagaggttgttaaaattacacactgtcctacactgctgaccagagatggagat
cgcattcgaagtaatggaaagtttgggggccttcagaataaagctcctccaatggataaa
cttcggggaatggtatttggagccccaataccaaaacagtgcctgatcttaggggaacaa
atagaccttcttcagcagtaccgcactgcagtgtgcaggctgggcacggttaacgaggac
cttaacggtcagttgaagtaccttcacactcctgatatgaagaagaaaaaacaagaactt
gatgaacaggagaaaaatctgaaactaatagagcagaaactagggatgactcccacacgt
aaatgtaatgactcactgcgtcatccaacgacagattgtccaattcctcctaaaagaatg
agaagagaagctacaagacaaaggattataaccaaaacagatctgtga
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