Camelus dromedarius (Arabian camel): 105094417
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Entry
105094417 CDS
T04642
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105094417 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdk03041
]
105094417 (EFTUD2)
Spliceosome [BR:
cdk03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
105094417 (EFTUD2)
Complex C
U5 SnRNP specific factors
105094417 (EFTUD2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
105094417
NCBI-ProteinID:
XP_010984742
LinkDB
All DBs
Position
16:37468881..37503450
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AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDDDVGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatactgacttgtatgatgagtttgggaattatattggaccagagcttgattctgat
gaagatgatgatgaattgggcagagagaccaaagatcttgatgagatggatgatgatgac
gacgatgatgacgtaggagatcatgacgaagaccaccctgggatggaggtggtgctgcat
gaggacaaaaagtactaccccacagccgaggaggtgtatgggcctgaagtggagaccatt
gttcaggaggaggacacccagcctctcacagaacccatcattaagccagtgaaaaccaag
aaattcactctgatggagcagacattacctgttacggtgtatgaaatggatttcttggca
gatctgatggataactcagagctcatcaggaatgtgaccctttgtggccacctccaccat
ggcaagacatgttttgtagattgtttaatagagcagactcacccggaaatccgaaagcgc
tatgaccaagatctgtgctacactgacatcctcttcacagagcaagagagaggcgttggc
atcaaaagtactcctgtgacggtggttttgccagataccaaaggaaaatcttacctcttc
aatatcatggacactccaggacacgtgaatttttctgatgaggtcacagctggcttgcgc
atctcagatggagtggtccttttcatcgatgctgctgagggcgtgatgctgaacacagag
cggctgatcaagcatgccgtgcaagagaggctggcggtcaccgtgtgcatcaacaagatt
gaccgactgatcctggagctgaagctgcctcccactgatgcttattacaagctgcgtcac
attgtagatgaggtcaacggattaataagcatgtattccactgacgagaacctgatcctt
tccccactcctgggcaacgtctgcttctccagctcccagtacagcatctgcttcacgctg
ggctcctttgccaagatctatgccgacacctttggtgatattaactaccaggaatttgct
aaaagactctggggtgacatctacttcaaccccaagacgcgaaagttcacaaaaaaggcc
ccaaccagcagctcccagaggagctttgtggagtttatcttggagcccctttataagatc
ctcgctcaggttgtgggtgatgtagacaccagcctcccaaggaccctggacgagctaggc
atccacctgaccaaggaggaactgaagctgaacatccgccccctgctcaggctggtctgc
aaaaagttctttggcgagtttacaggctttgtggacatgtgtgtgcagcacatcccctct
ccaaaggtgggcgccaagcccaagattgagcacacctacaccggtggtgtggactccgac
ctcggcgaggccatgagcgactgtgaccctgatggtcccctgatgtgccacacgaccaag
atgtacagcacagatgatggagttcagtttcatgcctttggcagagtgctaagtggcacc
atccatgctgggcagcctgtgaaggtgctgggggagaactacaccctggaggatgaggaa
gactcccagatatgcaccgtgggccgcctttggatctctgtggccaggtaccacattgag
gtgaaccgtgttcctgctggcaactgggttctgatcgaaggtgttgaccaaccaattgtg
aagacagcgactataactgaaccccgaggcaatgaggaggctcagattttccggcccttg
aagttcaacaccacatctgttatcaagattgccgtggagccagtcaacccctcagagctg
cccaagatgctggacggcctgcgcaaggtcaacaagagctacccatccctcaccaccaag
gtggaagaatctggcgagcacgtgattttgggtactggggaactctacctggactgtgtg
atgcacgacttgcggaagatgtactcagagatagacatcaaggtggctgatcccgttgtc
acattctgtgagacagtggtagaaacatcctccctcaagtgctttgctgaaacgcccaat
aagaagaacaagatcaccatgattgctgagcctctcgagaagggcctcgccgaggacata
gagaacgaggtggtccaaatcacatggaacaggaagaaactgggagagttctttcagacc
aagtatgactgggatctgctggctgcccgttccatctgggcttttggccctgatgccact
ggccccaacatcctggtggatgataccctgccctctgaggtggacaaggctcttctcggc
tcagtgaaggacagcatcgttcaaggtttccagtggggaaccagggaggggcccctttgt
gatgagctgattcgaaatgtcaagtttaagatcctggatgctgtggttgcccaggagccc
ctgcaccggggtgggggccaaatcatccccacagccaggagagttgtctattctgccttc
ctcatggccacgcctcgtctgatggagccctactactttgtagaggtccaggcccctgca
gattgtgtctctgctgtctacactgtcctggccaggcgcaggggacatgtgactcaggat
gcacccattccaggctcccctctctacaccatcaaagctttcatcccagccattgactct
tttggctttgagactgatctgcggactcacacccagggtcaggcattttccttgtctgtc
ttccatcattggcagattgtacctggtgatcctctggacaagagcattgtcatccgcccc
ttggagccacagccagctcctcacctggcccgggaattcatgattaaaacccgacgtagg
aagggcctgagtgaagatgtgagcatcagcaagttcttcgatgatcctatgttactggag
cttgccaagcaggatgttgtgctcaattaccccatgtga
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