Camelus dromedarius (Arabian camel): 105105588
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Entry
105105588 CDS
T04642
Symbol
AGRN
Name
(RefSeq) agrin isoform X1
KO
K06254
agrin
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk04512
ECM-receptor interaction
cdk04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105105588 (AGRN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105105588 (AGRN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cdk00535
]
105105588 (AGRN)
Proteoglycans [BR:
cdk00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
105105588 (AGRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
EGF_laminin
SEA
Kazal_CFAI
EGF
Laminin_G_3
hEGF
Motif
Other DBs
NCBI-GeneID:
105105588
NCBI-ProteinID:
XP_031319595
LinkDB
All DBs
Position
13:272134..291397
Genome browser
AA seq
1959 aa
AA seq
DB search
MPPLPLERDPRQQRGVSLLVRYFMIPCNVCLILLATSTLGFAVLLFLNNYKPGTHFTPVP
PTPPDACRGMLCGFGAVCEPSAEGPGRASCVCKKSTCPSVVAPVCGSDASTYSNECELQR
AQCSQQRRIRLLRRGPCGTRDPCSNVTCSFGSTCARSADGLTATCLCPATCQGTPEGPVC
GSDGTDYPSECQLLRRACARQEDIFKKFDGPCDPCQGALNDLSRICRVNPRTRRPEMLLR
PESCPPRRAPVCGDDGVTYDNDCVMGRTGATRGLLLQKVRSGQCQPRDQCPEACRFSAVC
LSRRGHPRCSCDRVTCDGAYRPVCAHDGHTYDNDCWRQQAECHQQHSIPAKHQGPCDQPP
SPCRGVQCPFGATCAVKNGEAECACQQACSGIYDPVCGSDGVTYGSTCELEATACALGRE
IRVARRGPCDRCGQCHFGALCEAETGRCVCPSECVALVQPVCGSDGRTYASECELHVYAC
THQISLHVASAGHCQTCGDTVCAFGAVCSAGQCVCPRCERPPPGPVCGSDGVTYRSSCEL
REAACQQQAQIEEARAGPCEQAECGSGGSGSGEDGECEQELCHQRGGVWDEDSEDGPCVC
DFSCQSVLRSPVCGSDGVTYSTECELKKARCESRQELYIVAQGACRGPTLAPLPPAVPLH
CTQTPYGCCQDNTTAAGGVGLAGCPSFCQCNPHGSYSGTCDPATGQCSCRPGVGGLKCDR
CEPGFWNFRGIVTDGRSGCTPCSCDPLGAVRDDCEQMTGLCSCKPGVAGPKCGQCPDGRA
LGPTGCETDSLAPKTCAEMHCEFGASCVEEAGSAHCVCPTPTCPGASATKVCGSDGVTYG
NECQLRTIACRQGLDISIQSLGPCQGDVASDPHPTSASMATSGLDLSEELLPPPSALPLT
PSSTPRSRPTPRPFSRPQTTASPLRTTARPMLTMPPTAPSTAASLATSAFGESGSADGSG
DEELSGDLEASGAGSGGLELPEGNSAVTPGPPIERASCYNSPMGCCSDGKTPSLDAEGSN
CPATRAFQGVLELEGVEGQELFYTPEMADPKSELFGETARSIESALDDLFRNSDVKKDFR
SVRLRDLGPGSSVRAIVDVHFDPTTTFRALDVGRALLRQIQVSRRRSLGVRRPLQEHVRF
MDFDWFPAFFTGATPAAATARATTVARLPPSAATPRAFYPSHTSRPVSRTTAPATTHQLP
TTAPSRVPGRRPLPPGTQQPPRPCDSQPCLHGGTCQDQGSGRDFTCSCPAGRWGAICEKA
LRPAIPAFGGHSFLAFPTLRAYHTLRLALEFRALELQGLLLYNGNARGKDFLALALLGGR
VQLRFDTGSGPAVLTSSVPVQPGRWHHLELSRHWRQGTLSVDGETPVLGQSPSGTDGLNL
DTDLFVGGIPEDQASVVLERTSVSVGLRGCIRLLDVNNQQLDLSVWQGSVTRSSRVGECG
DHPCLPNPCLSGAPCQALEAGMFHCQCPPGRFGPTCADEKDPCQPNPCHGAAPCHVLPQG
EAECECPQGRGGSLCQTVLEQDGIQPFLADFSSFSYLELKGLHTFERDLGEKMVLEVVFL
ARGPSGLLLYNGQKADGKGDFVSLALHDRLLEFRYDLGKGAAVIRSKEPVALGAWTRVSL
ERNGRKGALRVGDGPRVLGESPKSRKVPHTILNLKEPLYIGGAPDFSKLARAAAVASGFN
GAIQLVSLNGLQLLTREHVVRAVDVSSFADHPCTRATGHPCLNGASCLPREASYECLCPG
GFSGLHCEKGLIEKAAGDLDALAFDGRTYIEYLNAVTESELTNEIPAPEAPDSGALHSEK
ALQSNRFELSLRTEATQGLVLWSGKATERADYVALAIVDGRLQLTYDLGSQPVVLRSTVL
VNTNRWLRVRAHREQREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLEKLPAGQALP
KAYGTGFVGCLRDVVVGRRPLHLLEDAVTKPELRPCPAL
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgctgccgctggagcgggacccccggcagcagcgcggggtctccctgctcgtg
cggtatttcatgatcccctgtaacgtctgcctgatcctcctggccacatccacgcttggc
tttgcggtgctgctcttcctcaacaactacaaacctgggacccacttcacaccagtgcct
ccgacacctccggatgcatgccgaggaatgttgtgtggcttcggtgccgtgtgtgagccc
agcgcagagggtccgggcagagcctcctgtgtgtgcaagaagagcacctgccccagcgtg
gtggcacctgtgtgcggctcagatgcctccacctacagcaacgagtgcgagctgcagcgg
gcacagtgcagccagcagaggcgcatccgcctgctgcgcaggggaccctgcgggacccga
gacccttgctccaatgtaacctgtagctttggcagcacctgtgcgcgctcagcagacggt
ctgacggccacgtgcctgtgccctgccacatgccaggggacccccgagggccccgtgtgt
ggcagcgatggcactgactaccccagcgagtgccagctcttgcgccgtgcctgcgcccgt
caggaagacatcttcaagaagttcgacggcccttgcgacccctgccagggcgccctcaat
gacctcagccgcatctgccgcgtgaacccgcgcacacggcgcccggagatgctcctgcgg
ccagagagctgccctccccgacgggcacctgtgtgtggggacgatggggtcacctatgat
aacgactgcgtcatgggccgaacgggagccacccgtggtctcctcctccagaaagtgcgc
tctggccagtgccagccccgagaccagtgcccggaggcttgcaggttcagtgctgtgtgc
ctgtcccgccgaggccacccccgctgctcctgcgaccgtgtcacctgtgatggagcctac
agacccgtgtgtgcccacgatgggcacacatatgacaacgactgctggcgccagcaggcc
gagtgtcaccagcagcacagcatccctgccaagcaccagggcccgtgtgaccagcccccg
tccccctgccgtggggtgcagtgcccatttggggccacatgtgctgtgaagaatggggaa
gctgagtgtgcatgtcagcaggcgtgttcgggcatctacgatcccgtgtgtggcagcgat
ggcgtcacgtatggcagcacgtgcgagctggaggctacggcctgcgccctcgggcgggag
atccgggtggctcgcagaggaccctgtgaccgctgtgggcagtgccactttggagccctg
tgtgaggctgagactgggcgctgcgtgtgcccctctgagtgcgtggctttggtccagcct
gtgtgtggctctgacgggcgcacttatgccagtgagtgtgaactacacgtctatgcctgc
acccaccagatcagcctgcacgtggcctcggctggacactgccagacctgcggagatacc
gtgtgtgcctttggggcagtgtgctcggcagggcagtgtgtgtgtccccggtgtgagcgc
cctccgcctggccctgtgtgtggcagcgatggtgtaacctaccgcagttcatgtgagcta
cgcgaggctgcctgccagcagcaggcgcagatcgaggaggcccgggcagggccgtgtgag
caggctgagtgcggctcaggtggctccggctctggagaggatggcgagtgtgagcaggag
ctgtgccatcagagaggcggtgtctgggatgaggactcggaggacgggccgtgtgtctgc
gacttcagctgccaaagtgtcctgaggagcccggtctgcggctcagatggggtcacttac
agcaccgagtgtgagctgaagaaggctagatgtgaatcccggcaagagctgtacatcgtg
gctcagggagcctgccgcggccctactctggccccgctgccacctgcagttcccctgcac
tgcactcagaccccctacggctgctgccaggacaacaccactgctgccgggggtgtgggc
ctggctggctgccccagcttctgccagtgcaacccacatggctcctacagcggcacctgt
gacccagccacaggccagtgctcctgccgcccgggcgtggggggcctcaagtgtgaccgc
tgtgagcccggcttctggaacttccgtggtatcgtcactgatggccggagcggctgcacc
ccctgtagctgtgaccccctgggtgccgtgcgggatgactgtgagcagatgaccgggctg
tgctcctgcaagcctggggtggctggacccaagtgtgggcagtgtccagacggccgtgcc
ctgggccctactggctgtgaaacagactccttggcacccaagacctgtgctgagatgcac
tgtgaattcggggcatcctgtgtggaagaggctggctctgcccactgtgtatgcccaaca
cccacctgtccgggggccagtgctaccaaggtctgcgggtcagatggagtcacctacggc
aacgagtgccagctgaggaccatcgcctgccgccagggcttggacatctctatccagagc
ctcggcccctgccagggagatgtcgcttctgaccctcatcccacatctgcatctatggcc
acctcggggcttgacctgagcgaggagttgctgcccccacccagcgccctccccctgact
cccagcagtaccccccgcagccggcccacccctcgacccttctcacgacctcagaccact
gccagccctctcaggaccactgcaaggcccatgctgaccatgcctcccacggccccctcc
acagcagccagccttgccacatctgccttcggtgaatctggcagcgctgacgggagcggt
gatgaggagctgagtggtgacctggaggccagcggggctggctcaggaggacttgagctc
cctgagggcaacagtgcggtgacccctgggccgcccattgagagggcctcctgctacaac
tcaccaatgggctgctgctcagatggcaagacgccttcactggacgcagagggctccaac
tgtcctgccaccagggcattccaaggggtgctggagctcgagggggtcgagggccaggag
ctgttctacacgccagagatggctgaccccaagtcagagctgtttggagagactgccagg
agcatcgagagcgcactggatgacctcttccggaactcggacgttaagaaggacttccga
agtgtccgcctacgggacttggggcccggcagctcagtccgagccattgtggatgtgcac
ttcgaccccaccacaaccttcagggcacttgatgtgggccgggccctgctccggcagatc
caggtgtccaggcgccggtccctaggggtgaggcggcctctgcaggaacatgtgcggttc
atggacttcgactggtttcctgcgttcttcacgggagccacccctgctgcagccacagcc
agagccaccactgtggcccgcctgcctccttcagctgcgacccctcgggccttctaccct
agtcacactagccggcccgtcagcaggaccacagctcctgccaccacacaccagctgccc
accactgcccccagtcgtgtgcctggacgccggcccctgcccccaggaacccagcagccc
ccaaggccctgcgactcacagccatgcctccacggggggacctgccaggaccagggctca
ggcagagacttcacctgcagctgcccagcgggcaggtggggcgccatctgtgagaaggca
ctgcgccccgccataccagcctttgggggccactccttcctggccttccctaccctccgt
gcctaccacaccctgcgcctggcactcgagttccgggcgctggagctccaggggctgctg
ctctacaacggcaacgccaggggcaaggacttcctggcactggcactgcttgggggccgt
gtgcagctcaggttcgacacaggttcagggcctgcagtgctcaccagctccgtgcccgtg
cagcctggccggtggcatcacctggagctatctcggcactggcgccagggtacactctct
gtggacggtgagactcctgtcctgggccagagccccagcggcactgatggactcaacctg
gacacagacctttttgtgggtggcatccctgaggaccaggcttctgtggtgcttgagcgg
acctctgtcagcgtcggtcttaggggctgtatccgcctgctggacgtcaacaaccagcag
ctggacctaagcgtatggcaagggtctgtgactcgaagctcccgcgtgggcgagtgtggg
gaccacccctgcctgcccaacccctgcctcagcggggccccgtgccaggccctggaggct
ggcatgttccactgtcagtgcccacccggccgctttggcccgacctgtgcagatgagaag
gacccttgtcagccaaacccctgccatggggcagccccctgccacgtgctgccccagggc
gaagccgagtgcgagtgcccccagggccggggaggcagcctctgccaaacagtcttggag
caggatggcatccagcccttcctggccgacttcagcagcttctcctacctggagctgaaa
ggcctgcacacctttgagcgggacctgggggagaagatggtgctggaggtggtcttcctg
gcgcggggccccagcggcctgctcctctacaacgggcagaaggcagacggcaagggggac
tttgtgtcactggcgttgcacgaccgcctgctggagttccgctatgacctgggcaagggg
gcagcagtcatcaggagcaaggagccagtggccctgggtgcctggacccgggtctccctg
gagcggaacggccgcaaaggggctctgcgtgttggcgatgggccccgtgtgctgggggag
tccccgaaatcccgcaaggtgccgcacaccatcctcaacctgaaggagccactctatatt
gggggggcccctgacttcagcaaactggcccgggctgctgcggtggcctctggcttcaat
ggcgccatccagctggtctccctgaatggtctccagctgctgacccgggagcacgtggtg
cgggcggtggacgtctcatcctttgcagaccacccttgtacccgggccacaggtcaccct
tgcctcaacggggcctcctgtctccctcgggaggcctcctacgagtgcctgtgccctggg
ggcttctcagggctgcactgtgagaagggcctgattgagaaggcagcaggggatctggac
gctctggcctttgacggacggacctacatcgagtacctcaacgccgtgaccgagagcgaa
ctgaccaatgagatcccagcccctgaagctccagattccggggccctccacagtgagaag
gcgctacagagcaaccgctttgagctgagcctgcgcactgaggccacacaggggctggtg
ctgtggagcggcaaggccacagagcgggcagactacgtcgcactggccatcgtggacgga
cgcctgcagctgacttacgacctgggctcccagcccgtggtgctgcgctccaccgtacta
gtcaacaccaaccgctggttgcgggtcagggcgcacagggagcagagggaaggttccctt
caggtgggcaatgaggctcctgtgaccggctcctccccactgggcgccacacaactggac
acagacggagccctgtggctgggtggcctggagaagttgcctgcgggccaggccctgccc
aaggcctacggcacgggcttcgtgggctgcctgcgggacgtggtggtgggtcggcgcccg
ctgcacctgctggaggacgccgtcaccaagccggagcttcggccctgtcctgccctgtga
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